RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TIMP1P01033 207 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 ICAM1P05362 532 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 BEX3Q00994 111 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 TRDNQ13061 729 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 COL9A3Q14050 684 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-206ENST00000544964 ADCK5Q3MIX3 580 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 GNASQ5JWF2 1037 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 TTBK2Q6IQ55 1244 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 BTNL9Q6UXG8 535 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 CYB5R4Q7L1T6 521 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
ACTN1-206ENST00000544964 NCOA7Q8NI08 942 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 DCAF4Q8WV16 495 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 KCNB2Q92953 911 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 PURBQ96QR8 312 aaKnown RBP14.58□□□□□ -0.08
ACTN1-206ENST00000544964 ZKSCAN3Q9BRR0 538 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 SEMA6BQ9H3T3 888 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 MROH7Q68CQ1 1323 aa14.58□□□□□ -0.08
ACTN1-206ENST00000544964 ASB14A6NK59 587 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 ARVCFO00192 962 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 SLC16A2P36021 539 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 TNFAIP2Q03169 654 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 CCDC96Q2M329 555 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 TMEM63BQ5T3F8 832 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 CHST3Q7LGC8 479 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 TLK2Q86UE8 772 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.57□□□□□ -0.08
ACTN1-206ENST00000544964 FBXO16Q8IX29 292 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-206ENST00000544964 MORC4Q8TE76 937 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 TMEM47Q9BQJ4 181 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 BACH2Q9BYV9 841 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 SPC25Q9HBM1 224 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 PDGFCQ9NRA1 345 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 ZSWIM5Q9P217 1185 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 MUC3AQ02505 3323 aa14.57□□□□□ -0.08
ACTN1-206ENST00000544964 SCN10AQ9Y5Y9 1956 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 NFIBO00712 420 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 CD4P01730 458 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 PDHBP11177 359 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 TOP1P11387 765 aaKnown RBP14.56□□□□□ -0.08
ACTN1-206ENST00000544964 SMPD1P17405 629 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 TSGA10IPQ3SY00 556 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 SYDE2Q5VT97 1194 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 TAPT1Q6NXT6 567 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 CXCL17Q6UXB2 119 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 C16orf59Q7L2K0 433 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 MB21D2Q8IYB1 491 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-206ENST00000544964 SLC43A3Q8NBI5 491 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 MYLIPQ8WY64 445 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.56□□□□□ -0.082e-9■■■□□ 15.5
ACTN1-206ENST00000544964 TCP11L1Q9NUJ3 509 aa14.56□□□□□ -0.08
ACTN1-206ENST00000544964 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-206ENST00000544964 TMEM265A0A087WTH1 108 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 CPA1P15085 419 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 ANTXR2P58335 489 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 KRT32Q14532 448 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 FSCN1Q16658 493 aaKnown RBP14.55□□□□□ -0.08
ACTN1-206ENST00000544964 RASIP1Q5U651 963 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 NSMFQ6X4W1 530 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 SLC30A10Q6XR72 485 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 EEPD1Q7L9B9 569 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 JAKMIP1Q96N16 626 aaKnown RBP14.55□□□□□ -0.08
ACTN1-206ENST00000544964 GRIN2DO15399 1336 aa14.55□□□□□ -0.08
ACTN1-206ENST00000544964 MYH6P13533 1939 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 SNHG28P0DPA3 235 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 CSF2RAP15509 400 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 DNAJB2P25686 324 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 TMEM240Q5SV17 173 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 MAFAQ8NHW3 353 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-206ENST00000544964 CLEC4DQ8WXI8 215 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 ZSCAN10Q96SZ4 725 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-206ENST00000544964 PPP1R12CQ9BZL4 782 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 VTA1Q9NP79 307 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 TANC1Q9C0D5 1861 aa14.54□□□□□ -0.08
ACTN1-206ENST00000544964 TNKSO95271 1327 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 UMODL1Q5DID0 1318 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 PRC1O43663 620 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 ALDH5A1P51649 535 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-206ENST00000544964 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.081e-12■□□□□ 8.7
ACTN1-206ENST00000544964 BAATQ14032 418 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-206ENST00000544964 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
ACTN1-206ENST00000544964 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 VTI1AQ96AJ9 217 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 TCEANC2Q96MN5 208 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 COL25A1Q9BXS0 654 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-206ENST00000544964 C22orf23Q9BZE7 217 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
ACTN1-206ENST00000544964 WDR19Q8NEZ3 1342 aa14.52□□□□□ -0.08
ACTN1-206ENST00000544964 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.09
ACTN1-206ENST00000544964 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-206ENST00000544964 CABYRO75952 493 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
ACTN1-206ENST00000544964 CYP2C18P33260 490 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 MCM5P33992 734 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 NT5C2P49902 561 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms