RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 APBA3O96018 575 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 PDIA3P30101 505 aaKnown RBP9.89□□□□□ -0.83
NECAP1-207ENST00000544891 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 TPH2Q8IWU9 490 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 MYL10Q9BUA6 226 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 LPXNO60711 386 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 CRCPO75575 148 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 HSPA6P17066 643 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 LIFRP42702 1097 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 MTX1Q13505 466 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 CUL4AQ13619 759 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 TFDP1Q14186 410 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 NEDD9Q14511 834 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 SMCR8Q8TEV9 937 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-207ENST00000544891 VCX3BQ9H321 246 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 HESX1Q9UBX0 185 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 MAPK8IP1Q9UQF2 711 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 ATP8B1O43520 1251 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 IRX4P78413 519 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 SEMA3FQ13275 785 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 ALCAMQ13740 583 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 ARHGEF16Q5VV41 709 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 CLEC4GQ6UXB4 293 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 SLF1Q9BQI6 1058 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 LSG1Q9H089 658 aaKnown RBP9.89□□□□□ -0.83
NECAP1-207ENST00000544891 VCXQ9H320 206 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 MLXIPQ9HAP2 919 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 PFDN4Q9NQP4 134 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 HEG1Q9ULI3 1381 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-207ENST00000544891 BTDP43251 543 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 LIG4P49917 911 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 CDC37Q16543 378 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-207ENST00000544891 DENND2CQ68D51 928 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 TTLL7Q6ZT98 887 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 C2CD5Q86YS7 1000 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 CCDC89Q8N998 374 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 TSC1Q92574 1164 aa9.89□□□□□ -0.83
NECAP1-207ENST00000544891 LRP6O75581 1613 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 EFCAB8A8MWE9 144 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 IFNAR1P17181 557 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 TPD52P55327 224 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 CSRNP1Q96S65 589 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 WNK3Q9BYP7 1800 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 ABCC12Q96J65 1359 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 A0A1B0GUA9 196 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 SMIM23A6NLE4 172 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 RCAN1P53805 252 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 ABCB5Q2M3G0 1257 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 USH1GQ495M9 461 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 PLA2G4DQ86XP0 818 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 NELFCDQ8IXH7 590 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 RAB20Q9NX57 234 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 DDX25Q9UHL0 483 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 AHDC1Q5TGY3 1603 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 PHLPP2Q6ZVD8 1323 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 RPN1P04843 607 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 LMNB1P20700 586 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 YARSP54577 528 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 SLC12A2P55011 1212 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 PSMD2Q13200 908 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 FAM47AQ5JRC9 791 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 SH2D4BQ5SQS7 431 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 MAP7D3Q8IWC1 876 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 LMNTD2Q8IXW0 634 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 TDRD7Q8NHU6 1098 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 CABS1Q96KC9 395 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 RAB3IPQ96QF0 476 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 MED4Q9NPJ6 270 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 PANK4Q9NVE7 773 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 TMEM63CQ9P1W3 806 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 ADD3Q9UEY8 706 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 FMNL1O95466 1100 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 SH3BGRP55822 239 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 PTH1RQ03431 593 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 SUPT20HL1Q3ZLR7 823 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 APOA5Q6Q788 366 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 VSIG1Q86XK7 387 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 LSM14BQ9BX40 385 aaKnown RBP9.88□□□□□ -0.83
NECAP1-207ENST00000544891 RASSF4Q9H2L5 321 aa9.88□□□□□ -0.83
NECAP1-207ENST00000544891 ADD1P35611 737 aaKnown RBP9.87□□□□□ -0.83
NECAP1-207ENST00000544891 DMP1Q13316 513 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-207ENST00000544891 C10orf76Q5T2E6 689 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 FAM207AQ9NSI2 230 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-207ENST00000544891 PCDHA7Q9UN72 937 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 PCDHA1Q9Y5I3 950 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 RFX7Q2KHR2 1363 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 C5P01031 1676 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 GOLGA8CPA6NN73 597 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 TTLL1O95922 423 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 TROVE2P10155 538 aaKnown RBP eCLIP9.87□□□□□ -0.83
NECAP1-207ENST00000544891 TCP10Q12799 353 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 RASA3Q14644 834 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 TSNAXIP1Q2TAA8 658 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 XKR9Q5GH70 373 aa9.87□□□□□ -0.83
NECAP1-207ENST00000544891 RCOR1Q9UKL0 485 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms