RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 IL23AQ9NPF7 189 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 BDP1A6H8Y1 2624 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 NCOR1O75376 2440 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 ACRP10323 421 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 PBX2P40425 430 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 ALDH5A1P51649 535 aaPredicted RBP16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 AKNAD1Q5T1N1 836 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 TBC1D10CQ8IV04 446 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 PBX4Q9BYU1 374 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 TRPV6Q9H1D0 765 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 HIPK3Q9H422 1215 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 GPCPD1Q9NPB8 672 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 TOMM22Q9NS69 142 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 FRMPD2Q68DX3 1309 aaPredicted RBP16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 CCDC171Q6TFL3 1326 aa16.34■□□□□ 0.21
SEMA4D-224ENST00000544513 GRXCR1A8MXD5 290 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 HAND2P61296 217 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 PSMC6P62333 389 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 AAMPQ13685 434 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 LNPKQ9C0E8 428 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 CXXC1Q9P0U4 656 aaPredicted RBP16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 UMODL1Q5DID0 1318 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
SEMA4D-224ENST00000544513 B4GALT4O60513 344 aa16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 REV3LO60673 3130 aa16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 EDNRBP24530 442 aa16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 WNT8AQ9H1J5 351 aa16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 OSBPL3Q9H4L5 887 aa16.32■□□□□ 0.2
SEMA4D-224ENST00000544513 PTPDC1A2A3K4 754 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 FGBP02675 491 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 RPS6P62753 249 aaKnown RBP16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 RNF207Q6ZRF8 634 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
SEMA4D-224ENST00000544513 NEDD4P46934 1319 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 SDSP20132 328 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 NT5C2P49902 561 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 CPT1AP50416 773 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 DNERQ8NFT8 737 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 ANKS1AQ92625 1134 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 MAF1Q9H063 256 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 XIRP2A4UGR9 3374 aa16.3■□□□□ 0.2
SEMA4D-224ENST00000544513 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 A6NJR5 290 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 CALML3P27482 149 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 CCL23P55773 120 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 NUCB1Q02818 461 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 RAB30Q15771 203 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 CHD1LQ86WJ1 897 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 ESR2Q92731 530 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 RILPL2Q969X0 211 aa16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 MTIF3Q9H2K0 278 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-224ENST00000544513 NKRFO15226 690 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 PDE4DQ08499 809 aa16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 MTG1Q9BT17 334 aaPredicted RBP16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 RWDD1Q9H446 243 aaPredicted RBP16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 TRMT13Q9NUP7 481 aaKnown RBP16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
SEMA4D-224ENST00000544513 TNKSO95271 1327 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 ZNF213O14771 459 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 KPNA6O60684 536 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 IGHDP01880 384 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 SUPT20HL2P0C7V6 817 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 GOLGA8HP0CJ92 632 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 ADGRE1Q14246 886 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 OR6J1Q8NGC5 347 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 MPHOSPH6Q99547 160 aaKnown RBP16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 ZKSCAN3Q9BRR0 538 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 CPVLQ9H3G5 476 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 PRDM12Q9H4Q4 367 aa16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 YBX2Q9Y2T7 364 aaKnown RBP16.27■□□□□ 0.2
SEMA4D-224ENST00000544513 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 KDM4AO75164 1064 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 MYL3P08590 195 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 CYP2C9P11712 490 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms