RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 JMJD8Q96S16 334 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 CDC6Q99741 560 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 DHRS4Q9BTZ2 278 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 PIF1Q9H611 641 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 C19orf44Q9H6X5 657 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 FAM53CQ9NYF3 392 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 CLEC1BQ9P126 229 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 GPR160Q9UJ42 338 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 YBX2Q9Y2T7 364 aaKnown RBP3.54□□□□□ -1.84
YBX3-214ENST00000544501 TRBV23-1A0A0A0MS06 115 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 C7orf72A4D263 438 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 MEFVO15553 781 aaPredicted RBP3.53□□□□□ -1.84
YBX3-214ENST00000544501 PRKCAP17252 672 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 TRHRP34981 398 aaPredicted RBP3.53□□□□□ -1.84
YBX3-214ENST00000544501 LTBRP36941 435 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 ARL4AP40617 200 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 SUMO1P63165 101 aaKnown RBP3.53□□□□□ -1.84
YBX3-214ENST00000544501 CYP4F8P98187 520 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 YOD1Q5VVQ6 348 aaPredicted RBP3.53□□□□□ -1.84
YBX3-214ENST00000544501 MCTP1Q6DN14 999 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 DENND5AQ6IQ26 1287 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 PPIL6Q8IXY8 311 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 DCAF4Q8WV16 495 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 FAM168AQ92567 244 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 DIO2Q92813 273 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 KISS1RQ969F8 398 aaPredicted RBP3.53□□□□□ -1.84
YBX3-214ENST00000544501 ZFYVE21Q9BQ24 234 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 PLCD4Q9BRC7 762 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 RNF32Q9H0A6 362 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 SLC6A17Q9H1V8 727 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 PDLIM7Q9NR12 457 aa3.53□□□□□ -1.84
YBX3-214ENST00000544501 HRKO00198 91 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 ARNTLO00327 626 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 MYO1BO43795 1136 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 IGSF3O75054 1194 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 ERVFRD-1P60508 538 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 MVKQ03426 396 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 PRSS53Q2L4Q9 553 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 STYK1Q6J9G0 422 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 CPNE8Q86YQ8 564 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 IRF2BP1Q8IU81 584 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 CCDC103Q8IW40 242 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 SYNPOQ8N3V7 929 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 NUP43Q8NFH3 380 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 SH3TC2Q8TF17 1288 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 INTS4Q96HW7 963 aaKnown RBP3.52□□□□□ -1.85
YBX3-214ENST00000544501 EXOC2Q96KP1 924 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 GPR27Q9NS67 375 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.52□□□□□ -1.85
YBX3-214ENST00000544501 IMPACTQ9P2X3 320 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 MRPS23Q9Y3D9 190 aaKnown RBP3.52□□□□□ -1.85
YBX3-214ENST00000544501 TIMM13Q9Y5L4 95 aaPredicted RBP3.52□□□□□ -1.85
YBX3-214ENST00000544501 CARMIL2Q6F5E8 1435 aa3.52□□□□□ -1.85
YBX3-214ENST00000544501 A0A1W2PQJ5 194 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 ZNF503-AS2A6NEH8 195 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 SRGAP3O43295 1099 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 EFEMP2O95967 443 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 MPOP05164 745 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 NAT1P18440 290 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 RPL11P62913 178 aaKnown RBP3.51□□□□□ -1.85
YBX3-214ENST00000544501 GABREP78334 506 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 NTRK3Q16288 839 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 INF2Q27J81 1249 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 FAM209AQ5JX71 171 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 FOXB2Q5VYV0 432 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 MBLAC2Q68D91 279 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 MPZL3Q6UWV2 235 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 USP53Q70EK8 1073 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 MAMDC2Q7Z304 686 aaPredicted RBP3.51□□□□□ -1.85
YBX3-214ENST00000544501 Q8N1Y9 231 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 LZTR1Q8N653 840 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 RCBTB1Q8NDN9 531 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 PTPRN2Q92932 1015 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 RNPC3Q96LT9 517 aaKnown RBP3.51□□□□□ -1.85
YBX3-214ENST00000544501 MTA3Q9BTC8 594 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 TMEM260Q9NX78 707 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 TMEFF2Q9UIK5 374 aaPredicted RBP3.51□□□□□ -1.85
YBX3-214ENST00000544501 PTCH2Q9Y6C5 1203 aa3.51□□□□□ -1.85
YBX3-214ENST00000544501 TLDC2A0PJX2 215 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 OR14I1A6ND48 311 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 H7BY64 318 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 AQP7O14520 342 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 ABLIM1O14639 778 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 KCNQ2O43526 872 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 PPP1R11O60927 126 aaPredicted RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 EFCAB14O75071 495 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 CYBBP04839 570 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 C6orf222P0C671 652 aaPredicted RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 MSL3P1P0C860 447 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 GLI4P10075 376 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 GPR85P60893 370 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 TMEM62Q0P6H9 643 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 LSAMPQ13449 338 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 SQSTM1Q13501 440 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 CBX2Q14781 532 aaPredicted RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 KIR3DS1Q14943 382 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 NR1I3Q14994 352 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 KIZQ2M2Z5 673 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 TRIM61Q5EBN2 209 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms