RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 LIFRP42702 1097 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 RANBP2P49792 3224 aaKnown RBP27.03■■□□□ 1.92
CHFR-222ENST00000544093 ACLYP53396 1101 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 RTP1P59025 263 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 KRT32Q14532 448 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 SAMD3Q8N6K7 520 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 CTCFLQ8NI51 663 aaPredicted RBP27.03■■□□□ 1.92
CHFR-222ENST00000544093 PRO3102Q9H379 93 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 RIOX1Q9H6W3 641 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 SENP2Q9HC62 589 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 MAP3K20Q9NYL2 800 aaKnown RBP27.03■■□□□ 1.92
CHFR-222ENST00000544093 PRKAG2Q9UGJ0 569 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 ZMYND8Q9ULU4 1186 aaPredicted RBP27.03■■□□□ 1.92
CHFR-222ENST00000544093 Q9Y3F1 56 aa27.03■■□□□ 1.92
CHFR-222ENST00000544093 A0A1W2PQ45 241 aaPredicted RBP27.02■■□□□ 1.92
CHFR-222ENST00000544093 A0A1W2PQY0 241 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 CALM1P0DP23 149 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 CALM2P0DP24 149 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 CALM3P0DP25 149 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 TSGA10IPQ3SY00 556 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 NFXL1Q6ZNB6 911 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 NOL8Q76FK4 1167 aaKnown RBP27.02■■□□□ 1.92
CHFR-222ENST00000544093 ZNF654Q8IZM8 581 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 FERMT2Q96AC1 680 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 PURBQ96QR8 312 aaKnown RBP27.02■■□□□ 1.92
CHFR-222ENST00000544093 TRIOBPQ9H2D6 2365 aa27.02■■□□□ 1.92
CHFR-222ENST00000544093 CCDC69A6NI79 296 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 SH2B2O14492 632 aaPredicted RBP27.01■■□□□ 1.91
CHFR-222ENST00000544093 ADCY6O43306 1168 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 EDNRBP24530 442 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 BMP8BP34820 402 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 GNAQP50148 359 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 PDE4DQ08499 809 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 KCNA10Q16322 511 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 CCSAPQ6IQ19 270 aaPredicted RBP27.01■■□□□ 1.91
CHFR-222ENST00000544093 TAPT1Q6NXT6 567 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 FBXO16Q8IX29 292 aaPredicted RBP27.01■■□□□ 1.91
CHFR-222ENST00000544093 LZTS2Q9BRK4 669 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 PPP4R2Q9NY27 417 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 RBM27Q9P2N5 1060 aaKnown RBP27.01■■□□□ 1.91
CHFR-222ENST00000544093 GNEQ9Y223 722 aaKnown RBP27.01■■□□□ 1.91
CHFR-222ENST00000544093 ATP11BQ9Y2G3 1177 aa27.01■■□□□ 1.91
CHFR-222ENST00000544093 SMARCA1P28370 1054 aa27■■□□□ 1.91
CHFR-222ENST00000544093 GNASQ5JWF2 1037 aa27■■□□□ 1.91
CHFR-222ENST00000544093 EEPD1Q7L9B9 569 aa27■■□□□ 1.91
CHFR-222ENST00000544093 GLT1D1Q96MS3 346 aa27■■□□□ 1.91
CHFR-222ENST00000544093 AP5M1Q9H0R1 490 aa27■■□□□ 1.91
CHFR-222ENST00000544093 STARD7Q9NQZ5 370 aa27■■□□□ 1.91
CHFR-222ENST00000544093 PCDHA1Q9Y5I3 950 aa27■■□□□ 1.91
CHFR-222ENST00000544093 ELP1O95163 1332 aa26.99■■□□□ 1.91
CHFR-222ENST00000544093 SYN1P17600 705 aa26.99■■□□□ 1.91
CHFR-222ENST00000544093 GHRHRQ02643 423 aa26.99■■□□□ 1.91
CHFR-222ENST00000544093 TLK2Q86UE8 772 aa26.99■■□□□ 1.91
CHFR-222ENST00000544093 NSUN6Q8TEA1 469 aaKnown RBP26.99■■□□□ 1.91
CHFR-222ENST00000544093 NEK1Q96PY6 1258 aa26.99■■□□□ 1.91
CHFR-222ENST00000544093 GDF15Q99988 308 aa26.99■■□□□ 1.91
CHFR-222ENST00000544093 PNMA6FA0A0J9YX94 578 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.98■■□□□ 1.91
CHFR-222ENST00000544093 ZEB2O60315 1214 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 HMGB1P09429 215 aaKnown RBP26.98■■□□□ 1.91
CHFR-222ENST00000544093 SMPD1P17405 629 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 TRIM60Q495X7 471 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 DUSP28Q4G0W2 176 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 HOMER1Q86YM7 354 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 SYTL5Q8TDW5 730 aaPredicted RBP26.98■■□□□ 1.91
CHFR-222ENST00000544093 IWS1Q96ST2 819 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 SPZ1Q9BXG8 430 aa26.98■■□□□ 1.91
CHFR-222ENST00000544093 BAZ2BQ9UIF8 2168 aaKnown RBP26.98■■□□□ 1.91
CHFR-222ENST00000544093 RBM47A0AV96 593 aaKnown RBP26.97■■□□□ 1.91
CHFR-222ENST00000544093 REC8O95072 547 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 ASGR1P07306 291 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 SGMS1Q86VZ5 419 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 SCFD2Q8WU76 684 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 PIGSQ96S52 555 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 PDGFCQ9NRA1 345 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 SLC12A7Q9Y666 1083 aa26.97■■□□□ 1.91
CHFR-222ENST00000544093 MROH7Q68CQ1 1323 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 MYADML2A6NDP7 307 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 NKRFO15226 690 aaKnown RBP eCLIP26.96■■□□□ 1.91
CHFR-222ENST00000544093 CYTH3O43739 400 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 CABYRO75952 493 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 MAGEA10P43363 369 aaPredicted RBP26.96■■□□□ 1.91
CHFR-222ENST00000544093 HSD17B4P51659 736 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 FSCN1Q16658 493 aaKnown RBP26.96■■□□□ 1.91
CHFR-222ENST00000544093 TOX2Q96NM4 488 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 RMDN3Q96TC7 470 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 LBHD1Q9BQE6 289 aaPredicted RBP26.96■■□□□ 1.91
CHFR-222ENST00000544093 WDR11Q9BZH6 1224 aa26.96■■□□□ 1.91
CHFR-222ENST00000544093 PPP1R11O60927 126 aaPredicted RBP26.95■■□□□ 1.9
CHFR-222ENST00000544093 CFBP00751 764 aa26.95■■□□□ 1.9
CHFR-222ENST00000544093 SYNE3Q6ZMZ3 975 aa26.95■■□□□ 1.9
CHFR-222ENST00000544093 DHX32Q7L7V1 743 aaKnown RBP26.95■■□□□ 1.9
CHFR-222ENST00000544093 SEZ6LQ9BYH1 1024 aa26.95■■□□□ 1.9
CHFR-222ENST00000544093 GPHNQ9NQX3 736 aaPredicted RBP26.95■■□□□ 1.9
CHFR-222ENST00000544093 DDX49Q9Y6V7 483 aaKnown RBP26.95■■□□□ 1.9
CHFR-222ENST00000544093 CTAGE5O15320 804 aa26.94■■□□□ 1.9
CHFR-222ENST00000544093 DYNC1LI2O43237 492 aaPredicted RBP26.94■■□□□ 1.9
CHFR-222ENST00000544093 EPB41L2O43491 1005 aaKnown RBP26.94■■□□□ 1.9
CHFR-222ENST00000544093 PPP2R5BQ15173 497 aa26.94■■□□□ 1.9
CHFR-222ENST00000544093 ANKRD33Q7Z3H0 272 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms