RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 UTP11Q9Y3A2 253 aaKnown RBP14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 MED23Q9ULK4 1368 aa14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 H7C1D1 291 aa14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 FDPSP14324 419 aaKnown RBP14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 ARMCX5Q6P1M9 558 aa14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 GPBP1Q86WP2 473 aa14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 ANKRD2Q9GZV1 360 aa14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 PCDHA12Q9UN75 941 aa14.28□□□□□ -0.12
TUBGCP2-210ENST00000543663 CCDC160A6NGH7 325 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 PRR16Q569H4 304 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 KRT25Q7Z3Z0 450 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 OGFOD1Q8N543 542 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 LRRC37A3O60309 1634 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 FAM196BA6NMK8 535 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 KRIT1O00522 736 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 MMP1P03956 469 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 UBXN2AP68543 259 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 ALDH8A1Q9H2A2 487 aaPredicted RBP14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 EPB41L5Q9HCM4 733 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 HDAC6Q9UBN7 1215 aa14.27□□□□□ -0.12
TUBGCP2-210ENST00000543663 SLFN14P0C7P3 912 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 ERCC5P28715 1186 aaPredicted RBP14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 SLC16A2P36021 539 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 IFT88Q13099 833 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 TRIM28Q13263 835 aaKnown RBP14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 EHMT1Q9H9B1 1298 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 KANSL2Q9H9L4 492 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 GINS2Q9Y248 185 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 MOCS3O95396 460 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 EXOSC10Q01780 885 aaKnown RBP14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 CASP8Q14790 479 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 USP17L2Q6R6M4 530 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 MTUS1Q9ULD2 1270 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 DNM3Q9UQ16 869 aa14.27□□□□□ -0.13
TUBGCP2-210ENST00000543663 COL15A1P39059 1388 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 PPP6R2O75170 966 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 IFNB1P01574 187 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 DESP17661 470 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 CDC25BP30305 580 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 CASP7P55210 303 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 SEL1L2Q5TEA6 688 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 MYCLP12524 364 aaPredicted RBP14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 PLCG2P16885 1265 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 COA7Q96BR5 231 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 GSDMAQ96QA5 445 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 FAM208AQ9UK61 1670 aaKnown RBP14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 E2F5Q15329 346 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 TSGA10IPQ3SY00 556 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 C3orf67Q6ZVT6 689 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 CCDC127Q96BQ5 260 aa14.26□□□□□ -0.13
TUBGCP2-210ENST00000543663 IFNAR1P17181 557 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 KRT31Q15323 416 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 APBB1IPQ7Z5R6 666 aaPredicted RBP14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 VSIG1Q86XK7 387 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 SPICE1Q8N0Z3 855 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 PP2D1A8MPX8 630 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 CLTAP09496 248 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 PABPC4Q13310 644 aaKnown RBP eCLIP14.25□□□□□ -0.131e-9■■■■■ 41.7
TUBGCP2-210ENST00000543663 CLEC10AQ8IUN9 316 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 ENOX1Q8TC92 643 aaKnown RBP14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 ARHGEF1Q92888 912 aaKnown RBP14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 LRRC45Q96CN5 670 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 EPB41L4AQ9HCS5 686 aaPredicted RBP14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 NKIRAS1Q9NYS0 192 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 HYOU1Q9Y4L1 999 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 CCDC151A5D8V7 595 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 MEIS1O00470 390 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 CUL4BQ13620 913 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 TRIML1Q8N9V2 468 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 TBC1D31Q96DN5 1066 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 CCDC51Q96ER9 411 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 PAGE5Q96GU1 130 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 ABCC6O95255 1503 aa14.25□□□□□ -0.13
TUBGCP2-210ENST00000543663 ARHGEF35A5YM69 484 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 FLOT1O75955 427 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 FMNL1O95466 1100 aaPredicted RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 PRPHP41219 470 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 BTDP43251 543 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 ADAM9Q13443 819 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 TUBB2AQ13885 445 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 E4F1Q66K89 784 aaPredicted RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 ZNF365Q70YC5 407 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 TUBB2BQ9BVA1 445 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 DBNDD1Q9H9R9 158 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 ARMCX3Q9UH62 379 aaPredicted RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 KIAA1024Q9UPX6 916 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 ESYT3A0FGR9 886 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 AP5Z1O43299 807 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 ACTN4O43707 911 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms