RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 AAMPQ13685 434 aa13.96□□□□□ -0.17
PTPN6-219ENST00000542848 HERVK_113Q902F9 699 aa13.96□□□□□ -0.17
PTPN6-219ENST00000542848 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
PTPN6-219ENST00000542848 HIPK3Q9H422 1215 aa13.96□□□□□ -0.17
PTPN6-219ENST00000542848 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
PTPN6-219ENST00000542848 RBM47A0AV96 593 aaKnown RBP13.95□□□□□ -0.18
PTPN6-219ENST00000542848 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 FGBP02675 491 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 PDHBP11177 359 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
PTPN6-219ENST00000542848 NMIQ13287 307 aaPredicted RBP13.95□□□□□ -0.18
PTPN6-219ENST00000542848 AKNAD1Q5T1N1 836 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 TMEM63BQ5T3F8 832 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 PBX4Q9BYU1 374 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 WDR11Q9BZH6 1224 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 MTIF3Q9H2K0 278 aaKnown RBP13.95□□□□□ -0.18
PTPN6-219ENST00000542848 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
PTPN6-219ENST00000542848 NCOR1O75376 2440 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 FRMPD2Q68DX3 1309 aaPredicted RBP13.94□□□□□ -0.18
PTPN6-219ENST00000542848 CCDC171Q6TFL3 1326 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 CHD7Q9P2D1 2997 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 GRXCR1A8MXD5 290 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 NFIBO00712 420 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 TRANK1O15050 2925 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 PTGS1P23219 599 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 NT5C2P49902 561 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 HAND2P61296 217 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 RNF207Q6ZRF8 634 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
PTPN6-219ENST00000542848 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
PTPN6-219ENST00000542848 CLEC4DQ8WXI8 215 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 TTC28Q96AY4 2481 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
PTPN6-219ENST00000542848 NOC4LQ9BVI4 516 aaKnown RBP13.94□□□□□ -0.18
PTPN6-219ENST00000542848 TRPV6Q9H1D0 765 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 RNF41Q9H4P4 317 aaPredicted RBP13.94□□□□□ -0.18
PTPN6-219ENST00000542848 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
PTPN6-219ENST00000542848 WDR19Q8NEZ3 1342 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 TET1Q8NFU7 2136 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
PTPN6-219ENST00000542848 B4GALT4O60513 344 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 SUPT20HL2P0C7V6 817 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 CALML3P27482 149 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 PBX2P40425 430 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 CPT1AP50416 773 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 PSMC6P62333 389 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 RAB30Q15771 203 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 DNERQ8NFT8 737 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
PTPN6-219ENST00000542848 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 MSRAQ9UJ68 235 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 SPTBN5Q9NRC6 3674 aaKnown RBP13.93□□□□□ -0.18
PTPN6-219ENST00000542848 TANC1Q9C0D5 1861 aa13.93□□□□□ -0.18
PTPN6-219ENST00000542848 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 B4DLN1 442 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 SDSP20132 328 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 CCL23P55773 120 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 PURAQ00577 322 aaKnown RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 CCDC178Q5BJE1 867 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 SMC5Q8IY18 1101 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 ESR2Q92731 530 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 GAS2L1Q99501 681 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 MAF1Q9H063 256 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 ALDH8A1Q9H2A2 487 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 CXXC1Q9P0U4 656 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-219ENST00000542848 REV3LO60673 3130 aa13.92□□□□□ -0.18
PTPN6-219ENST00000542848 ZNF213O14771 459 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 KPNA6O60684 536 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 EDNRBP24530 442 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 PDE4DQ08499 809 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 SLC30A10Q6XR72 485 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 OTOP2Q7RTS6 562 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 TBC1D10CQ8IV04 446 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 OR6J1Q8NGC5 347 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 MTG1Q9BT17 334 aaPredicted RBP13.91□□□□□ -0.18
PTPN6-219ENST00000542848 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
PTPN6-219ENST00000542848 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
PTPN6-219ENST00000542848 RAD50Q92878 1312 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 A6NJR5 290 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 PFKMP08237 780 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 MYL3P08590 195 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 IQCA1Q86XH1 822 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 USP38Q8NB14 1042 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 ANKS1AQ92625 1134 aa13.9□□□□□ -0.18
PTPN6-219ENST00000542848 PRDM12Q9H4Q4 367 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms