RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	PWP2	Q15269	919 aa	Known RBP	18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	DUSP28	Q4G0W2	176 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	RASIP1	Q5U651	963 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	TBC1D10C	Q8IV04	446 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	SMC5	Q8IY18	1101 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	CLEC4D	Q8WXI8	215 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	WDR11	Q9BZH6	1224 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	HIPK3	Q9H422	1215 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	RNF41	Q9H4P4	317 aa	Predicted RBP	18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	IL23A	Q9NPF7	189 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	PNMA2	Q9UL42	364 aa		18.87	■□□□□ 0.61
DDX11-222	ENST00000542777	CALML3	P27482	149 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	SLC30A10	Q6XR72	485 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	RNF207	Q6ZRF8	634 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	ESR2	Q92731	530 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	TIFA	Q96CG3	184 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	TRPV6	Q9H1D0	765 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	ZNF576	Q9H609	170 aa		18.86	■□□□□ 0.61
DDX11-222	ENST00000542777	UMODL1	Q5DID0	1318 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	GRXCR1	A8MXD5	290 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	ZNF213	O14771	459 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	B4GALT4	O60513	344 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	SNHG28	P0DPA3	235 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	CHD1L	Q86WJ1	897 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	PLEKHM2	Q8IWE5	1019 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	ZKSCAN3	Q9BRR0	538 aa		18.85	■□□□□ 0.61
DDX11-222	ENST00000542777	NEDD4	P46934	1319 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	WDR19	Q8NEZ3	1342 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	RBM47	A0AV96	593 aa	Known RBP	18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	FGB	P02675	491 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	PBX2	P40425	430 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	CCL23	P55773	120 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	RPS6	P62753	249 aa	Known RBP	18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	HERVK_113	Q902F9	699 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	NOC4L	Q9BVI4	516 aa	Known RBP	18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	PBX4	Q9BYU1	374 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	OSBPL3	Q9H4L5	887 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	POLR3E	Q9NVU0	708 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	UNC80	Q8N2C7	3258 aa		18.84	■□□□□ 0.61
DDX11-222	ENST00000542777	IGHD	P01880	384 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	GOLGA8H	P0CJ92	632 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	NUCB1	Q02818	461 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	PDE4D	Q08499	809 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	GPATCH4	Q5T3I0	446 aa	Known RBP	18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	CWC27	Q6UX04	472 aa	Known RBP	18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	DGKH	Q86XP1	1220 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	DNER	Q8NFT8	737 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	OR6J1	Q8NGC5	347 aa		18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	MPHOSPH6	Q99547	160 aa	Known RBP	18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	MTIF3	Q9H2K0	278 aa	Known RBP	18.83	■□□□□ 0.6
DDX11-222	ENST00000542777	CUL9	Q8IWT3	2517 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	MYL3	P08590	195 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	CPT1A	P50416	773 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	CCDC178	Q5BJE1	867 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	IQCA1	Q86XH1	822 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	UBA5	Q9GZZ9	404 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	CPVL	Q9H3G5	476 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	GPHN	Q9NQX3	736 aa	Predicted RBP	18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	DIAPH3	Q9NSV4	1193 aa		18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.82	■□□□□ 0.6
DDX11-222	ENST00000542777	NKRF	O15226	690 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	KDM4A	O75164	1064 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	EDNRB	P24530	442 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	PURA	Q00577	322 aa	Known RBP	18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	USH1G	Q495M9	461 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	OTOP2	Q7RTS6	562 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	PNMA1	Q8ND90	353 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	WNT8A	Q9H1J5	351 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	MSRA	Q9UJ68	235 aa		18.81	■□□□□ 0.6
DDX11-222	ENST00000542777	LAMA4	Q16363	1823 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777		B4DLN1	442 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	SUPT20HL2	P0C7V6	817 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	NT5C2	P49902	561 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	MRPL12	P52815	198 aa	Known RBP	18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	PPP2R5B	Q15173	497 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	RAB30	Q15771	203 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	BRDT	Q58F21	947 aa	Predicted RBP	18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	RPUSD2	Q8IZ73	545 aa	Known RBP	18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	RGS22	Q8NE09	1264 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	SCFD2	Q8WU76	684 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	MTG1	Q9BT17	334 aa	Predicted RBP	18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	KAT14	Q9H8E8	782 aa		18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	TRMT13	Q9NUP7	481 aa	Known RBP	18.8	■□□□□ 0.6
DDX11-222	ENST00000542777	RAD50	Q92878	1312 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	CDH23	Q9H251	3354 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777		B4E1Z4	1266 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	HIP1	O00291	1037 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	CYP2C9	P11712	490 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	CDC37	Q16543	378 aa	Predicted RBP	18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	EXOC6	Q8TAG9	804 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	ANKS1A	Q92625	1134 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	COPS5	Q92905	334 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	SCLY	Q96I15	445 aa		18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	GAS2L1	Q99501	681 aa	Predicted RBP	18.79	■□□□□ 0.6
DDX11-222	ENST00000542777	TNKS	O95271	1327 aa		18.78	■□□□□ 0.6
DDX11-222	ENST00000542777	KPNA6	O60684	536 aa		18.78	■□□□□ 0.6
DDX11-222	ENST00000542777	TXN	P10599	105 aa	Known RBP	18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms