RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 GRB10Q13322 594 aa4.14□□□□□ -1.75
KNTC1-213ENST00000542727 OR6P1Q8NGX9 317 aa4.14□□□□□ -1.75
KNTC1-213ENST00000542727 CPA5Q8WXQ8 436 aa4.14□□□□□ -1.75
KNTC1-213ENST00000542727 CRBNQ96SW2 442 aa4.14□□□□□ -1.75
KNTC1-213ENST00000542727 HAUS7Q99871 368 aa4.14□□□□□ -1.75
KNTC1-213ENST00000542727 PALD1Q9ULE6 856 aa4.14□□□□□ -1.75
KNTC1-213ENST00000542727 AURKAO14965 403 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 CBFA2T2O43439 604 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 PPM1BO75688 479 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 PLA2G1BP04054 148 aaKnown RBP4.13□□□□□ -1.75
KNTC1-213ENST00000542727 ASGR2P07307 311 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 ATF2P15336 505 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 ZNF16P17020 682 aaPredicted RBP4.13□□□□□ -1.75
KNTC1-213ENST00000542727 RTP5Q14D33 572 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 ZYXQ15942 572 aaKnown RBP4.13□□□□□ -1.75
KNTC1-213ENST00000542727 UBXN11Q5T124 520 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 LDLRAD1Q5T700 205 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 HEATR6Q6AI08 1181 aaKnown RBP4.13□□□□□ -1.75
KNTC1-213ENST00000542727 LZTR1Q8N653 840 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 ZDHHC15Q96MV8 337 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 BACE2Q9Y5Z0 518 aa4.13□□□□□ -1.75
KNTC1-213ENST00000542727 K7ESM1 405 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 TACR1P25103 407 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 SEPHS1P49903 392 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 GJA9P57773 515 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 ZNF827Q17R98 1081 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 ZXDCQ2QGD7 858 aaPredicted RBP4.12□□□□□ -1.75
KNTC1-213ENST00000542727 ZNF394Q53GI3 561 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 NT5DC1Q5TFE4 455 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 CARFQ8N187 725 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 CRACR2BQ8N4Y2 399 aaPredicted RBP4.12□□□□□ -1.75
KNTC1-213ENST00000542727 RCC1LQ96I51 464 aaKnown RBP4.12□□□□□ -1.75
KNTC1-213ENST00000542727 BACH2Q9BYV9 841 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 KLHL25Q9H0H3 589 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.12□□□□□ -1.75
KNTC1-213ENST00000542727 NTMQ9P121 344 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 PPT2Q9UMR5 302 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 MYRFQ9Y2G1 1151 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 HCFC2Q9Y5Z7 792 aa4.12□□□□□ -1.75
KNTC1-213ENST00000542727 PRICKLE3O43900 615 aaPredicted RBP4.11□□□□□ -1.75
KNTC1-213ENST00000542727 PAMP19021 973 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 PMLP29590 882 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 SOX9P48436 509 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 EIF6P56537 245 aaKnown RBP4.11□□□□□ -1.75
KNTC1-213ENST00000542727 AMPD2Q01433 879 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 SLC7A5Q01650 507 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 DLX2Q07687 328 aaPredicted RBP4.11□□□□□ -1.75
KNTC1-213ENST00000542727 CACNB2Q08289 660 aaPredicted RBP4.11□□□□□ -1.75
KNTC1-213ENST00000542727 PPP2R5DQ14738 602 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 GNPTABQ3T906 1256 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 RUFY4Q6ZNE9 571 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 TTLL7Q6ZT98 887 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 ZNF654Q8IZM8 581 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 SPATA25Q9BR10 227 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 FAM86C1Q9NVL1 165 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 DDX41Q9UJV9 622 aaKnown RBP4.11□□□□□ -1.75
KNTC1-213ENST00000542727 PCDHGB7Q9Y5F8 929 aa4.11□□□□□ -1.75
KNTC1-213ENST00000542727 C2orf71A6NGG8 1288 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 STXBP3O00186 592 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 SMARCA5O60264 1052 aaPredicted RBP4.1□□□□□ -1.75
KNTC1-213ENST00000542727 NOBOXO60393 691 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 NPHS1O60500 1241 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 NAT2P11245 290 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 MC3RP41968 323 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 GIPRP48546 466 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 WWC2Q6AWC2 1192 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 HHIPL2Q6UWX4 724 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 ADAT2Q7Z6V5 191 aaKnown RBP4.1□□□□□ -1.75
KNTC1-213ENST00000542727 GGNQ86UU5 652 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 DCP2Q8IU60 420 aaKnown RBP4.1□□□□□ -1.75
KNTC1-213ENST00000542727 ARHGEF39Q8N4T4 335 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 SMARCC2Q8TAQ2 1214 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 RASGRP4Q8TDF6 673 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 ZNF526Q8TF50 670 aaPredicted RBP4.1□□□□□ -1.75
KNTC1-213ENST00000542727 LNPKQ9C0E8 428 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 CGGBP1Q9UFW8 167 aaPredicted RBP4.1□□□□□ -1.75
KNTC1-213ENST00000542727 LTBP3Q9NS15 1303 aa4.1□□□□□ -1.75
KNTC1-213ENST00000542727 NPHP3-ACAD11A0A0J9YXS1 232 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 SCAMP3O14828 347 aaKnown RBP4.09□□□□□ -1.75
KNTC1-213ENST00000542727 CYP2C8P10632 490 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 VAMP1P23763 118 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 MAGEA10P43363 369 aaPredicted RBP4.09□□□□□ -1.75
KNTC1-213ENST00000542727 SARSP49591 514 aaKnown RBP4.09□□□□□ -1.75
KNTC1-213ENST00000542727 ZNF143P52747 638 aaPredicted RBP4.09□□□□□ -1.75
KNTC1-213ENST00000542727 POMZP3Q6PJE2 187 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 TTC9BQ8N6N2 239 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 LINC00482Q8N8I6 264 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 ADCY4Q8NFM4 1077 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 USP33Q8TEY7 942 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 GPR20Q99678 358 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 MTA3Q9BTC8 594 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 AP5M1Q9H0R1 490 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 PLA2G2DQ9UNK4 145 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 RWDD3Q9Y3V2 267 aa4.09□□□□□ -1.75
KNTC1-213ENST00000542727 A0A1B0GTL3 188 aa4.08□□□□□ -1.76
KNTC1-213ENST00000542727 A0A1W2PQH9 124 aa4.08□□□□□ -1.76
KNTC1-213ENST00000542727 ANKRD34BA5PLL1 514 aa4.08□□□□□ -1.76
KNTC1-213ENST00000542727 ITGB3P05106 788 aa4.08□□□□□ -1.76
KNTC1-213ENST00000542727 EPHX1P07099 455 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms