RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MMP19Q99542 508 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 LACTBP83111 547 aaPredicted RBP26.5■■□□□ 1.83
HOMER3-205ENST00000542541 GUCY1B3Q02153 619 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 GHRHRQ02643 423 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 GPR142Q7Z601 462 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 BLIDQ8IZY5 108 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 ABRAQ8N0Z2 381 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 A1CFQ9NQ94 594 aaKnown RBP26.5■■□□□ 1.83
HOMER3-205ENST00000542541 HSD17B4P51659 736 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 FCGRTP55899 365 aa26.5■■□□□ 1.83
HOMER3-205ENST00000542541 KRT2P35908 639 aa26.49■■□□□ 1.83
HOMER3-205ENST00000542541 RPS6P62753 249 aaKnown RBP26.49■■□□□ 1.83
HOMER3-205ENST00000542541 REXO1Q8N1G1 1221 aaKnown RBP26.49■■□□□ 1.83
HOMER3-205ENST00000542541 TBC1D5Q92609 795 aa26.49■■□□□ 1.83
HOMER3-205ENST00000542541 CYP39A1Q9NYL5 469 aa26.49■■□□□ 1.83
HOMER3-205ENST00000542541 MEIS2O14770 477 aa26.48■■□□□ 1.83
HOMER3-205ENST00000542541 TNPO2O14787 897 aaKnown RBP26.48■■□□□ 1.83
HOMER3-205ENST00000542541 STX6O43752 255 aa26.48■■□□□ 1.83
HOMER3-205ENST00000542541 PTPREP23469 700 aa26.48■■□□□ 1.83
HOMER3-205ENST00000542541 BAATQ14032 418 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-205ENST00000542541 USP17L6PQ6QN14 398 aa26.48■■□□□ 1.83
HOMER3-205ENST00000542541 VPS37CA5D8V6 355 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-205ENST00000542541 FKTNO75072 461 aa26.47■■□□□ 1.83
HOMER3-205ENST00000542541 FOSP01100 380 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-205ENST00000542541 GNL2Q13823 731 aaKnown RBP26.47■■□□□ 1.83
HOMER3-205ENST00000542541 ARHGEF6Q15052 776 aa26.47■■□□□ 1.83
HOMER3-205ENST00000542541 DIS3L2Q8IYB7 885 aaKnown RBP26.47■■□□□ 1.83
HOMER3-205ENST00000542541 SLC15A5A6NIM6 579 aa26.47■■□□□ 1.83
HOMER3-205ENST00000542541 HOXA13P31271 388 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-205ENST00000542541 PSMC4P43686 418 aa26.47■■□□□ 1.83
HOMER3-205ENST00000542541 NPY5RQ15761 445 aa26.47■■□□□ 1.83
HOMER3-205ENST00000542541 ERO1AQ96HE7 468 aa26.47■■□□□ 1.83
HOMER3-205ENST00000542541 SPDYE3A6NKU9 549 aa26.46■■□□□ 1.83
HOMER3-205ENST00000542541 AP3B2Q13367 1082 aa26.46■■□□□ 1.83
HOMER3-205ENST00000542541 UBE2SQ16763 222 aa26.46■■□□□ 1.83
HOMER3-205ENST00000542541 SYTL5Q8TDW5 730 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-205ENST00000542541 FOXP1Q9H334 677 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-205ENST00000542541 BIN2Q9UBW5 565 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-205ENST00000542541 SMCHD1A6NHR9 2005 aa26.45■■□□□ 1.83
HOMER3-205ENST00000542541 POTEB2H3BUK9 544 aa26.45■■□□□ 1.82
HOMER3-205ENST00000542541 CLK2P49760 499 aaKnown RBP26.45■■□□□ 1.82
HOMER3-205ENST00000542541 GRB14Q14449 540 aa26.45■■□□□ 1.82
HOMER3-205ENST00000542541 MCTP1Q6DN14 999 aa26.45■■□□□ 1.82
HOMER3-205ENST00000542541 SLC5A4Q9NY91 659 aa26.45■■□□□ 1.82
HOMER3-205ENST00000542541 BTBD18B2RXH4 712 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 ADORA2AP29274 412 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 SLC30A10Q6XR72 485 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 FCHSD1Q86WN1 690 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 ZNF296Q8WUU4 475 aaPredicted RBP26.44■■□□□ 1.82
HOMER3-205ENST00000542541 EHMT1Q9H9B1 1298 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 PCDHA6Q9UN73 950 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 PCDHA8Q9Y5H6 950 aa26.44■■□□□ 1.82
HOMER3-205ENST00000542541 ECM2O94769 699 aaPredicted RBP26.43■■□□□ 1.82
HOMER3-205ENST00000542541 GNRH1P01148 92 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 JAKMIP3Q5VZ66 844 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 KRT25Q7Z3Z0 450 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 OXER1Q8TDS5 423 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 SOCS4Q8WXH5 440 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 NUDT12Q9BQG2 462 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 ADD3Q9UEY8 706 aaKnown RBP26.43■■□□□ 1.82
HOMER3-205ENST00000542541 TSKSQ9UJT2 592 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 MTMR6Q9Y217 621 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 DNAJC25-GNG10A0A024R161 153 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 M0R2N6 131 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 HOXD10P28358 340 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 DPP9Q86TI2 863 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 TRIM47Q96LD4 638 aa26.43■■□□□ 1.82
HOMER3-205ENST00000542541 CCDC194A0A1B0GVG4 234 aa26.42■■□□□ 1.82
HOMER3-205ENST00000542541 U2AF2P26368 475 aaKnown RBP eCLIP26.42■■□□□ 1.824e-7■■■□□ 17.8
HOMER3-205ENST00000542541 MORN1Q5T089 497 aa26.42■■□□□ 1.82
HOMER3-205ENST00000542541 DNERQ8NFT8 737 aa26.42■■□□□ 1.82
HOMER3-205ENST00000542541 RASGRP4Q8TDF6 673 aa26.42■■□□□ 1.82
HOMER3-205ENST00000542541 TMEM260Q9NX78 707 aa26.42■■□□□ 1.82
HOMER3-205ENST00000542541 PGK2P07205 417 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 NUCB2P80303 420 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 NR5A1Q13285 461 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 FAM133AQ8N9E0 248 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 CD99L2Q8TCZ2 262 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 NSUN6Q8TEA1 469 aaKnown RBP26.41■■□□□ 1.82
HOMER3-205ENST00000542541 RMDN3Q96TC7 470 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 ARHGAP39Q9C0H5 1083 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 COL20A1Q9P218 1284 aa26.41■■□□□ 1.82
HOMER3-205ENST00000542541 CIZ1Q9ULV3 898 aaPredicted RBP26.41■■□□□ 1.82
HOMER3-205ENST00000542541 DIS3Q9Y2L1 958 aaKnown RBP26.41■■□□□ 1.82
HOMER3-205ENST00000542541 B4DLN1 442 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 ADAMTS3O15072 1205 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 CTGFP29279 349 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 DDIT3P35638 169 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 MAP2K5Q13163 448 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 NOSTRINQ8IVI9 506 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 TAAR1Q96RJ0 339 aa26.4■■□□□ 1.82
HOMER3-205ENST00000542541 MPHOSPH6Q99547 160 aaKnown RBP26.4■■□□□ 1.82
HOMER3-205ENST00000542541 ZSCAN22P10073 491 aaPredicted RBP26.39■■□□□ 1.82
HOMER3-205ENST00000542541 RGS2P41220 211 aa26.39■■□□□ 1.82
HOMER3-205ENST00000542541 CNTN2Q02246 1040 aa26.39■■□□□ 1.82
HOMER3-205ENST00000542541 NONOQ15233 471 aaKnown RBP eCLIP26.39■■□□□ 1.82
HOMER3-205ENST00000542541 ARHGEF16Q5VV41 709 aa26.39■■□□□ 1.82
HOMER3-205ENST00000542541 TNFRSF25Q93038 417 aa26.39■■□□□ 1.82
HOMER3-205ENST00000542541 ANO3Q9BYT9 981 aa26.39■■□□□ 1.82
HOMER3-205ENST00000542541 ZSCAN16Q9H4T2 348 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms