RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CCDC73Q6ZRK6 1079 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 EFCAB13Q8IY85 973 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 GPR161Q8N6U8 529 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 NUP133Q8WUM0 1156 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 TACO1Q9BSH4 297 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MXD3Q9BW11 206 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 RNF26Q9BY78 433 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PDGFDQ9GZP0 370 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 FAN1Q9Y2M0 1017 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 CNTNAP5Q8WYK1 1306 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 BIN1O00499 593 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 C21orf2O43822 256 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 CREB3O43889 395 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 RASA1P20936 1047 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 PTPAQ15257 358 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 MMS22LQ6ZRQ5 1243 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 C16orf86Q6ZW13 317 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 TMTC3Q6ZXV5 915 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 CATIPQ7Z7H3 387 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC44A5Q8NCS7 719 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 WASF1Q92558 559 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 SDF4Q9BRK5 362 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 NAT10Q9H0A0 1025 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 PSD3Q9NYI0 1048 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 MYH6P13533 1939 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 PHLPP2Q6ZVD8 1323 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 AP1G2O75843 785 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 CALM1P0DP23 149 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 CALM2P0DP24 149 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 CALM3P0DP25 149 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 PLCG2P16885 1265 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 XBP1P17861 261 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 CHRNA5P30532 468 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC7A5Q01650 507 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 ANO1Q5XXA6 986 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 TEX11Q8IYF3 940 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 ZNF483Q8TF39 744 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 ZC3H12CQ9C0D7 883 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 OSBPL5Q9H0X9 879 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 RETREG1Q9H6L5 497 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 STK32BQ9NY57 414 aa8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 SAP30BPQ9UHR5 308 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-221ENST00000542407 A0A1W2PQ27 194 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 A0A1W2PQ64 194 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 A0A1W2PQD8 194 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 FANCGO15287 622 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 PRPF3O43395 683 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 TRPC1P48995 793 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 ADALQ6DHV7 355 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 CCDC70Q6NSX1 233 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 RBM12BQ8IXT5 1001 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 BICD1Q96G01 975 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 KCNQ5Q9NR82 932 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 IMPACTQ9P2X3 320 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 ARIH1Q9Y4X5 557 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 KIF13BQ9NQT8 1826 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 SIPA1L1O43166 1804 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 TSPY2A6NKD2 308 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 H0YIN7 160 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 TIMM44O43615 452 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 ABL2P42684 1182 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 NOVP48745 357 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 TFAP4Q01664 338 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 RBBP5Q15291 538 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 NPY5RQ15761 445 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 TRIM65Q6PJ69 517 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 SRBD1Q8N5C6 995 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 IQUBQ8NA54 791 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 KCNG4Q8TDN1 519 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 PLEKHG4BQ96PX9 1271 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 KCND1Q9NSA2 647 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 KCNJ14Q9UNX9 436 aa8.92□□□□□ -0.98
PDLIM5-221ENST00000542407 USP17L3A6NCW0 530 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 USP17L4A6NCW7 530 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 WDHD1O75717 1129 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 LMOD1P29536 600 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 TOB1P50616 345 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 CORO7P57737 925 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 GRIK3Q13003 919 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC39A14Q15043 492 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 USP17L1Q7RTZ2 530 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 NOSTRINQ8IVI9 506 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 FMR1NBQ8N0W7 255 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 PHF20Q9BVI0 1012 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 FOXP1Q9H334 677 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 SUGCTQ9HAC7 445 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 DDX4Q9NQI0 724 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 SPATS2LQ9NUQ6 558 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 LMCD1Q9NZU5 365 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 PLIN4Q96Q06 1357 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 ZC3H4Q9UPT8 1303 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 GREB1LQ9C091 1923 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 BTBD18B2RXH4 712 aa8.91□□□□□ -0.98
PDLIM5-221ENST00000542407 SPTLC2O15270 562 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms