RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 KRT40Q6A162 431 aa22.4■■□□□ 1.18
RAP1B-227ENST00000542018 RCSD1Q6JBY9 416 aa22.4■■□□□ 1.18
RAP1B-227ENST00000542018 VTA1Q9NP79 307 aa22.4■■□□□ 1.18
RAP1B-227ENST00000542018 ISY1Q9ULR0 285 aaKnown RBP22.4■■□□□ 1.18
RAP1B-227ENST00000542018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.4■■□□□ 1.187e-8■■■■■ 45.5
RAP1B-227ENST00000542018 CA3P07451 260 aa22.39■■□□□ 1.17
RAP1B-227ENST00000542018 PURAQ00577 322 aaKnown RBP22.39■■□□□ 1.17
RAP1B-227ENST00000542018 PDE4BQ07343 736 aa22.39■■□□□ 1.17
RAP1B-227ENST00000542018 IKQ13123 557 aaPredicted RBP22.39■■□□□ 1.17
RAP1B-227ENST00000542018 DUSP28Q4G0W2 176 aa22.39■■□□□ 1.17
RAP1B-227ENST00000542018 KIAA1211Q6ZU35 1233 aa22.39■■□□□ 1.17
RAP1B-227ENST00000542018 PTPRSQ13332 1948 aa22.39■■□□□ 1.17
RAP1B-227ENST00000542018 TNKSO95271 1327 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 ERC2O15083 957 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 NOVP48745 357 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 NSMFQ6X4W1 530 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 DEFB128Q7Z7B8 93 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 IL27Q8NEV9 243 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 PPP1R13LQ8WUF5 828 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 CERS4Q9HA82 394 aa22.38■■□□□ 1.17
RAP1B-227ENST00000542018 TANC1Q9C0D5 1861 aa22.37■■□□□ 1.17
RAP1B-227ENST00000542018 RBM47A0AV96 593 aaKnown RBP22.37■■□□□ 1.17
RAP1B-227ENST00000542018 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
RAP1B-227ENST00000542018 CCPG1Q9ULG6 757 aa22.37■■□□□ 1.17
RAP1B-227ENST00000542018 PFKMP08237 780 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 ALDH5A1P51649 535 aaPredicted RBP22.36■■□□□ 1.17
RAP1B-227ENST00000542018 BAATQ14032 418 aaPredicted RBP22.36■■□□□ 1.17
RAP1B-227ENST00000542018 TMEM67Q5HYA8 995 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 TTBK2Q6IQ55 1244 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 SPRED2Q7Z698 418 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 WDR11Q9BZH6 1224 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 NAPBQ9H115 298 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 TSPYL2Q9H2G4 693 aaPredicted RBP22.36■■□□□ 1.17
RAP1B-227ENST00000542018 RANBP17Q9H2T7 1088 aaKnown RBP22.36■■□□□ 1.17
RAP1B-227ENST00000542018 CHMP4BQ9H444 224 aaKnown RBP22.36■■□□□ 1.17
RAP1B-227ENST00000542018 STX8Q9UNK0 236 aa22.36■■□□□ 1.17
RAP1B-227ENST00000542018 NFIBO00712 420 aa22.35■■□□□ 1.17
RAP1B-227ENST00000542018 ICAM1P05362 532 aa22.35■■□□□ 1.17
RAP1B-227ENST00000542018 CTDSPL2Q05D32 466 aa22.35■■□□□ 1.17
RAP1B-227ENST00000542018 ZMYM1Q5SVZ6 1142 aa22.35■■□□□ 1.17
RAP1B-227ENST00000542018 PI4K2BQ8TCG2 481 aa22.35■■□□□ 1.17
RAP1B-227ENST00000542018 NACAP1Q9BZK3 213 aa22.35■■□□□ 1.17
RAP1B-227ENST00000542018 TRIP12Q14669 1992 aaPredicted RBP22.35■■□□□ 1.17
RAP1B-227ENST00000542018 MYL3P08590 195 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 SUPT20HL2P0C7V6 817 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 SLC16A2P36021 539 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 TAP1Q03518 808 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 NBPF20Q3BBV1 942 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 FAM122AQ96E09 287 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 EPHX3Q9H6B9 360 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 POLR3EQ9NVU0 708 aa22.34■■□□□ 1.17
RAP1B-227ENST00000542018 TLL1O43897 1013 aa22.33■■□□□ 1.17
RAP1B-227ENST00000542018 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
RAP1B-227ENST00000542018 OTUD7AQ8TE49 926 aaPredicted RBP22.33■■□□□ 1.17
RAP1B-227ENST00000542018 CLEC4DQ8WXI8 215 aa22.33■■□□□ 1.17
RAP1B-227ENST00000542018 GPATCH3Q96I76 525 aa22.33■■□□□ 1.17
RAP1B-227ENST00000542018 MTG1Q9BT17 334 aaPredicted RBP22.33■■□□□ 1.17
RAP1B-227ENST00000542018 MTMR7Q9Y216 660 aa22.33■■□□□ 1.17
RAP1B-227ENST00000542018 COL4A4P53420 1690 aaPredicted RBP22.33■■□□□ 1.16
RAP1B-227ENST00000542018 BRWD1Q9NSI6 2320 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 TSPY2A6NKD2 308 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 RBAK-RBAKDNI3L0D1 243 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 SLC3A2P08195 630 aaKnown RBP22.32■■□□□ 1.16
RAP1B-227ENST00000542018 IQCF3P0C7M6 154 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 SKIV2LQ15477 1246 aaKnown RBP22.32■■□□□ 1.16
RAP1B-227ENST00000542018 AAK1Q2M2I8 961 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 SLC30A10Q6XR72 485 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 OR6J1Q8NGC5 347 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 COPS5Q92905 334 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 C1QTNF1Q9BXJ1 281 aa22.32■■□□□ 1.16
RAP1B-227ENST00000542018 LPXNO60711 386 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 CPT1AP50416 773 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 GPNMBQ14956 572 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 HERC6Q8IVU3 1022 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 PHOSPHO2Q8TCD6 241 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 KHSRPQ92945 711 aaKnown RBP eCLIP22.31■■□□□ 1.163e-8■■■□□ 17.6
RAP1B-227ENST00000542018 CTAGE1Q96RT6 745 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 SLC9A7Q96T83 725 aa22.31■■□□□ 1.16
RAP1B-227ENST00000542018 ADD3Q9UEY8 706 aaKnown RBP22.31■■□□□ 1.16
RAP1B-227ENST00000542018 PITPNM1O00562 1244 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 RFC2P35250 354 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 VPS53Q5VIR6 699 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 NFRKBQ6P4R8 1299 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 DCAF4Q8WV16 495 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 ARNTL2Q8WYA1 636 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
RAP1B-227ENST00000542018 LRFN3Q9BTN0 628 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 RCAN3Q9UKA8 241 aa22.3■■□□□ 1.16
RAP1B-227ENST00000542018 LOC102724159A0A0B4J2E5 919 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 A6NJR5 290 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 GTPBP6O43824 516 aaPredicted RBP22.29■■□□□ 1.16
RAP1B-227ENST00000542018 FGRP09769 529 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 EDNRBP24530 442 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 HOXD11P31277 338 aaPredicted RBP22.29■■□□□ 1.16
RAP1B-227ENST00000542018 GRB10Q13322 594 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 PWP2Q15269 919 aaKnown RBP22.29■■□□□ 1.16
RAP1B-227ENST00000542018 CCDC96Q2M329 555 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 FAM47CQ5HY64 1035 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 PPP4R3BQ5MIZ7 849 aa22.29■■□□□ 1.16
RAP1B-227ENST00000542018 SYDE2Q5VT97 1194 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms