RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 KLF4O43474 513 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 IREB2P48200 963 aaKnown RBP6.99□□□□□ -1.29
CPSF7-220ENST00000541963 CASP7P55210 303 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 ITPK1Q13572 414 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 ARSHQ5FYA8 562 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 LARP1BQ659C4 914 aaKnown RBP6.99□□□□□ -1.29
CPSF7-220ENST00000541963 OVOS1Q6IE37 1185 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 TAB3Q8N5C8 712 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-220ENST00000541963 C2CD4AQ8NCU7 369 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-220ENST00000541963 LINC00116Q8NCU8 138 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 MKL1Q969V6 931 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 ATG4CQ96DT6 458 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 PHACTR3Q96KR7 559 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 TEX13AQ9BXU3 409 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-220ENST00000541963 ANTXR1Q9H6X2 564 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 TJP2Q9UDY2 1190 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 ACTL7BQ9Y614 415 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 CASZ1Q86V15 1759 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 QSER1Q2KHR3 1735 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 SCN11AQ9UI33 1791 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 C5P01031 1676 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 CHURC1-FNTBB4DL54 471 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 RPS6KA4O75676 772 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 STARD3NLO95772 234 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 NME1P15531 152 aaKnown RBP6.98□□□□□ -1.29
CPSF7-220ENST00000541963 RAB6AP20340 208 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 RFC4P35249 363 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 BMS1Q14692 1282 aaKnown RBP6.98□□□□□ -1.29
CPSF7-220ENST00000541963 WDR43Q15061 677 aaKnown RBP eCLIP6.98□□□□□ -1.29
CPSF7-220ENST00000541963 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 CDCP2Q5VXM1 449 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 MRPL41Q8IXM3 137 aaKnown RBP6.98□□□□□ -1.29
CPSF7-220ENST00000541963 FAM169BQ8N8A8 192 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 IL17REQ8NFR9 667 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 ACSF2Q96CM8 615 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-220ENST00000541963 DHRS1Q96LJ7 313 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 SRPK1Q96SB4 655 aaKnown RBP6.98□□□□□ -1.29
CPSF7-220ENST00000541963 CNNM2Q9H8M5 875 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
CPSF7-220ENST00000541963 TAF1LQ8IZX4 1826 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 DDAH1O94760 285 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 C4BP0C0L5 1744 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-220ENST00000541963 GBP1P32455 592 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 CCNFP41002 786 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 PREPP48147 710 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 SLC39A6Q13433 755 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 MAP7Q14244 749 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 ZNF790Q6PG37 636 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 TTC6Q86TZ1 520 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 PNISRQ8TF01 805 aaKnown RBP6.97□□□□□ -1.29
CPSF7-220ENST00000541963 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
CPSF7-220ENST00000541963 ISL2Q96A47 359 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 CCDC74BQ96LY2 380 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 FMNL2Q96PY5 1086 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 SYT17Q9BSW7 474 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 FOXQ1Q9C009 403 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 GSX1Q9H4S2 264 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-220ENST00000541963 PRKRIP1Q9H875 184 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-220ENST00000541963 ST7Q9NRC1 585 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 FAM105AQ9NUU6 356 aa6.97□□□□□ -1.29
CPSF7-220ENST00000541963 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
CPSF7-220ENST00000541963 ZNF831Q5JPB2 1677 aa6.96□□□□□ -1.29
CPSF7-220ENST00000541963 A0A1W2PQH9 124 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 CCDC85CA6NKD9 419 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 UPK3BL1B0FP48 263 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 UPK3BL2E5RIL1 263 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 ANP32CO43423 234 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 CST3P01034 146 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-220ENST00000541963 COL8A1P27658 744 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 NOS3P29474 1203 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 CAP2P40123 477 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 CRKLP46109 303 aaKnown RBP6.96□□□□□ -1.3
CPSF7-220ENST00000541963 LMOD3Q0VAK6 560 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 TAF7Q15545 349 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-220ENST00000541963 LRP10Q7Z4F1 713 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 DNAJC10Q8IXB1 793 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 SLFN12Q8IYM2 578 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 MFSD2AQ8NA29 543 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 GIMAP7Q8NHV1 300 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 PLEKHF1Q96S99 279 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 PHAXQ9H814 394 aaKnown RBP6.96□□□□□ -1.3
CPSF7-220ENST00000541963 DAGLAQ9Y4D2 1042 aa6.96□□□□□ -1.3
CPSF7-220ENST00000541963 A0A087WZG4 1122 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 TNFRSF10CO14798 259 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 LRIG2O94898 1065 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 RIPK4P57078 832 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 IFRD2Q12894 506 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-220ENST00000541963 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 BBS9Q3SYG4 887 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 Q6ZS46 218 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 MCM10Q7L590 875 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 TXNRD3Q86VQ6 643 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 FAM46AQ96IP4 442 aaKnown RBP6.95□□□□□ -1.3
CPSF7-220ENST00000541963 TNKS2Q9H2K2 1166 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms