RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 STK11IPQ8N1F8 1099 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 SOCS4Q8WXH5 440 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 ZSCAN10Q96SZ4 725 aaPredicted RBP9.43□□□□□ -0.9
LMO3-226ENST00000541589 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 GDPD2Q9HCC8 539 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 ORC3Q9UBD5 711 aaPredicted RBP9.43□□□□□ -0.9
LMO3-226ENST00000541589 DOCK1Q14185 1865 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 LOC285556D6RIA3 1793 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 STK36Q9NRP7 1315 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 NAV1Q8NEY1 1877 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 FIBPO43427 364 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 RANBP6O60518 1105 aaKnown RBP9.42□□□□□ -0.9
LMO3-226ENST00000541589 RGS20O76081 388 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 CYP2D6P10635 497 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 UBE2HP62256 183 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 SPP2Q13103 211 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 PABPC4Q13310 644 aaKnown RBP eCLIP9.42□□□□□ -0.9
LMO3-226ENST00000541589 PPP2R5BQ15173 497 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 SMYD5Q6GMV2 418 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 CAVIN1Q6NZI2 390 aaKnown RBP9.42□□□□□ -0.9
LMO3-226ENST00000541589 NYAP1Q6ZVC0 841 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 RAB11FIP4Q86YS3 637 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 TEX11Q8IYF3 940 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 SENP6Q9GZR1 1112 aaPredicted RBP9.42□□□□□ -0.9
LMO3-226ENST00000541589 DDX4Q9NQI0 724 aaKnown RBP9.42□□□□□ -0.9
LMO3-226ENST00000541589 BAZ2AQ9UIF9 1905 aaKnown RBP9.42□□□□□ -0.9
LMO3-226ENST00000541589 ELP1O95163 1332 aa9.42□□□□□ -0.9
LMO3-226ENST00000541589 CCDC196A0A1B0GTZ2 297 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 FSD2A1L4K1 749 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 GOLGA6L3A6NEY3 463 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 SMIM22K7EJ46 135 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 CDC27P30260 824 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
LMO3-226ENST00000541589 HMGCS2P54868 508 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 RHBDL3P58872 404 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 RTP1P59025 263 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 NTRK3Q16288 839 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 CCL14Q16627 93 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 RTN1Q16799 776 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 MORN1Q5T089 497 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 L1TD1Q5T7N2 865 aaKnown RBP9.41□□□□□ -0.9
LMO3-226ENST00000541589 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 ZNF654Q8IZM8 581 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 ZNF280CQ8ND82 737 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 TGFBRAP1Q8WUH2 860 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 SYAP1Q96A49 352 aaPredicted RBP9.41□□□□□ -0.9
LMO3-226ENST00000541589 C8orf76Q96K31 380 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 SCAND2PQ9GZW5 306 aaPredicted RBP9.41□□□□□ -0.9
LMO3-226ENST00000541589 TXNRD2Q9NNW7 524 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
LMO3-226ENST00000541589 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
LMO3-226ENST00000541589 PEX10O60683 326 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 GADD45BO75293 160 aaPredicted RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 PRDM1O75626 825 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 CALM1P0DP23 149 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 CALM2P0DP24 149 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 CALM3P0DP25 149 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 IFNAR1P17181 557 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 RXRAP19793 462 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 HOXA7P31268 230 aaPredicted RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 ZNF445P59923 1031 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 CCDC178Q5BJE1 867 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 IFIT1BQ5T764 474 aaKnown RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 MAPKAPK5Q8IW41 473 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 ENAHQ8N8S7 591 aaPredicted RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 FBXO18Q8NFZ0 1043 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 WASF1Q92558 559 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 MYL10Q9BUA6 226 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 OSBPL5Q9H0X9 879 aaPredicted RBP9.4□□□□□ -0.9
LMO3-226ENST00000541589 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 CFAP45Q9UL16 551 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 FLT1P17948 1338 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 SYNGAP1Q96PV0 1343 aa9.4□□□□□ -0.9
LMO3-226ENST00000541589 TSPY2A6NKD2 308 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 DNM1LO00429 736 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 PPFIA3O75145 1194 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 DDAH1O94760 285 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 MAPK4P31152 587 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 RGS2P41220 211 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 GRIN2CQ14957 1233 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 Q3C1V9 767 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 FAM173BQ6P4H8 233 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 CATIPQ7Z7H3 387 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 TTC6Q86TZ1 520 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 FANCBQ8NB91 859 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 GPRC5AQ8NFJ5 357 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 ATXN2LQ8WWM7 1075 aaKnown RBP9.4□□□□□ -0.91
LMO3-226ENST00000541589 LPAR1Q92633 364 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 BADQ92934 168 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 ZNF396Q96N95 335 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms