RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CCHCR1Q8TD31 782 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 WARS2Q9UGM6 360 aaKnown RBP16.67■□□□□ 0.26
HMGA2-210ENST00000541363 CREB3O43889 395 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 HSPA6P17066 643 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 CFLARO15519 480 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 TMCC1O94876 653 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 TMOD1P28289 359 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 FAM133BQ5BKY9 247 aaKnown RBP16.66■□□□□ 0.26
HMGA2-210ENST00000541363 SMCR8Q8TEV9 937 aaPredicted RBP16.66■□□□□ 0.26
HMGA2-210ENST00000541363 GRAMD1BQ3KR37 738 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 TRIM11Q96F44 468 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 MCTP2Q6DN12 878 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 FRA10AC1Q70Z53 315 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
HMGA2-210ENST00000541363 NFKBIAP25963 317 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 GUCY2DQ02846 1103 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
HMGA2-210ENST00000541363 ABHD8Q96I13 439 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
HMGA2-210ENST00000541363 METTL23Q86XA0 190 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 CNOT10Q9H9A5 744 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 SPAG7O75391 227 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 TRIM8Q9BZR9 551 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 L3MBTL1Q9Y468 752 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 PCDHB4Q9Y5E5 795 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 XPOTO43592 962 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 UFL1O94874 794 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 DLATP10515 647 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 MAP3K10Q02779 954 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 SLC9A5Q14940 896 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 ZKSCAN8Q15776 578 aaPredicted RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 DIABLOQ9NR28 239 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 H0YC42 278 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 BPIFB4P59827 614 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 DHX38Q92620 1227 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 MRPL40Q9NQ50 206 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 SLC27A2O14975 620 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 ESRRBO95718 433 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 ESRRAP11474 423 aaPredicted RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 PTPROQ16827 1216 aa16.65■□□□□ 0.26
HMGA2-210ENST00000541363 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
HMGA2-210ENST00000541363 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.26
HMGA2-210ENST00000541363 APOA1P02647 267 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 MRPS15P82914 257 aaKnown RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 AOC3Q16853 763 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 MAML1Q92585 1016 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 HACD3Q9P035 362 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 PNOCQ13519 176 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 RSRC2Q7L4I2 434 aaKnown RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 PCGF5Q86SE9 256 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 MAPK13O15264 365 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ENAHQ8N8S7 591 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ZFYVE19Q96K21 471 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 KDM1AO60341 852 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 TAC1P20366 129 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 PTK2Q05397 1052 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 CFAP36Q96G28 342 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 SUN2Q9UH99 717 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 MT-ND3P03897 115 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 CHMLP26374 656 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 AKAP4Q5JQC9 854 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 KCTD16Q68DU8 428 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ABI1Q8IZP0 508 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 MAGOHBQ96A72 148 aaKnown RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ALKBH8Q96BT7 664 aaKnown RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 CCNYQ8ND76 341 aa16.64■□□□□ 0.25
HMGA2-210ENST00000541363 ACTR5Q9H9F9 607 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 MAGED2Q9UNF1 606 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-210ENST00000541363 GJC2Q5T442 439 aaPredicted RBP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 PPM1KQ8N3J5 372 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 PAMP19021 973 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 MED21Q13503 144 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 TAGAPQ8N103 731 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 TRPV6Q9H1D0 765 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 JRKLQ9Y4A0 524 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 RASGRF2O14827 1237 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 POLGP54098 1239 aaPredicted RBP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 SLC4A7Q9Y6M7 1214 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 HIF1AQ16665 826 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 PHKBQ93100 1093 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms