RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 IL17AQ16552 155 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 PAGE5Q96GU1 130 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC34Q96HJ3 373 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 SEC63Q9UGP8 760 aaKnown RBP19.31■□□□□ 0.68
SPIDR-227ENST00000541342 SPATA1Q5VX52 437 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 C4orf32Q8N8J7 132 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 SYNRGQ9UMZ2 1314 aa19.31■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC175P0C221 793 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 TTBK2Q6IQ55 1244 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 KLHL10Q6JEL2 608 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 IGSF22Q8N9C0 903 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 SYMPKQ92797 1274 aaKnown RBP19.3■□□□□ 0.68
SPIDR-227ENST00000541342 PPP1R3GB7ZBB8 358 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 SIAH1Q8IUQ4 282 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 COL2A1P02458 1487 aaPredicted RBP19.3■□□□□ 0.68
SPIDR-227ENST00000541342 CLRN2A0PK11 232 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 EEF2P13639 858 aaKnown RBP19.3■□□□□ 0.68
SPIDR-227ENST00000541342 OAS2P29728 719 aaKnown RBP19.3■□□□□ 0.68
SPIDR-227ENST00000541342 JAG1P78504 1218 aa19.3■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC194A0A1B0GVG4 234 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 SMCO2A6NFE2 343 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 RRP1BQ14684 758 aaKnown RBP19.29■□□□□ 0.68
SPIDR-227ENST00000541342 GOLGA1Q92805 767 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 ZNRF3Q9ULT6 936 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 TCP10L2B9ZVM9 353 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 GDF11O95390 407 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 ABL1P00519 1130 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 TFRCP02786 760 aaKnown RBP19.29■□□□□ 0.68
SPIDR-227ENST00000541342 GYPCP04921 128 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 TXLNAP40222 546 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 SMC1AQ14683 1233 aaKnown RBP19.29■□□□□ 0.68
SPIDR-227ENST00000541342 SEPT2Q15019 361 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 INF2Q27J81 1249 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 KCTD1Q719H9 257 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 CCDC125Q86Z20 511 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 CPLX3Q8WVH0 158 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 JMJD4Q9H9V9 463 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 ARFGEF1Q9Y6D6 1849 aa19.29■□□□□ 0.68
SPIDR-227ENST00000541342 MFAP3LO75121 409 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 ADGRF4Q8IZF3 695 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 TRIM34Q9BYJ4 488 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 MTFR1LQ9H019 292 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 ZSWIM4Q9H7M6 989 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 ARFGAP3Q9NP61 516 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 COBLO75128 1261 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 FXR1P51114 621 aaKnown RBP eCLIP19.28■□□□□ 0.68
SPIDR-227ENST00000541342 SOGA3Q5TF21 947 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 NIM1KQ8IY84 436 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 MKL1Q969V6 931 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 CSRNP1Q96S65 589 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 ANKZF1Q9H8Y5 726 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 SLC16A2P36021 539 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 NEK11Q8NG66 645 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 COA7Q96BR5 231 aa19.28■□□□□ 0.68
SPIDR-227ENST00000541342 ZNF70Q9UC06 446 aaPredicted RBP19.28■□□□□ 0.68
SPIDR-227ENST00000541342 PPP1R11O60927 126 aaPredicted RBP19.27■□□□□ 0.68
SPIDR-227ENST00000541342 CASP14P31944 242 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 HNRNPH2P55795 449 aaKnown RBP19.27■□□□□ 0.68
SPIDR-227ENST00000541342 DALRD3Q5D0E6 543 aaKnown RBP19.27■□□□□ 0.68
SPIDR-227ENST00000541342 KANSL2Q9H9L4 492 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 NYAP2Q9P242 653 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 RNF225M0QZC1 329 aaPredicted RBP19.27■□□□□ 0.68
SPIDR-227ENST00000541342 FECHP22830 423 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 DLGAP5Q15398 846 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 C6orf50Q9HD87 102 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 CNTNAP1P78357 1384 aa19.27■□□□□ 0.68
SPIDR-227ENST00000541342 CXCL9Q07325 125 aa19.27■□□□□ 0.67
SPIDR-227ENST00000541342 CT47A1Q5JQC4 288 aaPredicted RBP19.27■□□□□ 0.67
SPIDR-227ENST00000541342 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.67
SPIDR-227ENST00000541342 H3BQF6 201 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 POLD1P28340 1107 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 CHMP4BP1P59074 171 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 LONRF2Q1L5Z9 754 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 CCDC96Q2M329 555 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 ABCB5Q2M3G0 1257 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 TMEM179Q6ZVK1 233 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 SRGAP1Q7Z6B7 1085 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 OGFOD1Q8N543 542 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 NAA15Q9BXJ9 866 aaKnown RBP19.26■□□□□ 0.67
SPIDR-227ENST00000541342 GPATCH4Q5T3I0 446 aaKnown RBP19.26■□□□□ 0.67
SPIDR-227ENST00000541342 STAMQ92783 540 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 TMEM60Q9H2L4 133 aa19.26■□□□□ 0.67
SPIDR-227ENST00000541342 ESYT2A0FGR8 921 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 MAP2K7O14733 419 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 GNA11P29992 359 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 ICA1Q05084 483 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 SPDYE2Q495Y8 402 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 GSDMAQ96QA5 445 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 MTRQ99707 1265 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-227ENST00000541342 CCDC151A5D8V7 595 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 GYS2P54840 703 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 E2F4Q16254 413 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 PPFIBP1Q86W92 1011 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 PNKPQ96T60 521 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 PUF60Q9UHX1 559 aaKnown RBP19.25■□□□□ 0.67
SPIDR-227ENST00000541342 USP17L10C9JJH3 530 aa19.25■□□□□ 0.67
SPIDR-227ENST00000541342 hCG_1984214I3L0E3 225 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms