RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 SUPT20HL1Q3ZLR7 823 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 TBCELQ5QJ74 424 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 VPS53Q5VIR6 699 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 CTR9Q6PD62 1173 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 BLOC1S2Q6QNY1 142 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 C16orf86Q6ZW13 317 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 CHSY3Q70JA7 882 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
CDKN3-206ENST00000541304 FCHSD1Q86WN1 690 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 IQCA1Q86XH1 822 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 TMTC2Q8N394 836 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
CDKN3-206ENST00000541304 SDR42E1Q8WUS8 393 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 TMEM87BQ96K49 555 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 BTBD6Q96KE9 485 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 PRMT6Q96LA8 375 aaPredicted RBP6.75□□□□□ -1.33
CDKN3-206ENST00000541304 NEK1Q96PY6 1258 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 ALDH8A1Q9H2A2 487 aaPredicted RBP6.75□□□□□ -1.33
CDKN3-206ENST00000541304 TAF1DQ9H5J8 278 aaPredicted RBP6.75□□□□□ -1.33
CDKN3-206ENST00000541304 TDRD3Q9H7E2 651 aaKnown RBP6.75□□□□□ -1.33
CDKN3-206ENST00000541304 MARK1Q9P0L2 795 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 PRR12Q9ULL5 1215 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 CYP46A1Q9Y6A2 500 aa6.75□□□□□ -1.33
CDKN3-206ENST00000541304 ERICH2A1L162 156 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 KRBA1A5PL33 1030 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 USP17L12C9JPN9 530 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 USP17L21D6R901 530 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 M0R2N6 131 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 MCM5P33992 734 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 ANP32AP39687 249 aaKnown RBP6.74□□□□□ -1.33
CDKN3-206ENST00000541304 PICALMQ13492 652 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 TBC1D10BQ4KMP7 808 aaPredicted RBP6.74□□□□□ -1.33
CDKN3-206ENST00000541304 LINC00114Q6XXX2 140 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 CDC37L1Q7L3B6 337 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 LDHDQ86WU2 507 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 MAPKAPK5Q8IW41 473 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 ZSCAN29Q8IWY8 852 aaPredicted RBP6.74□□□□□ -1.33
CDKN3-206ENST00000541304 SIX5Q8N196 739 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 CSRNP1Q96S65 589 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 VEZTQ9HBM0 779 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 GGA3Q9NZ52 723 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 SNX14Q9Y5W7 946 aa6.74□□□□□ -1.33
CDKN3-206ENST00000541304 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 ADAMTSL1Q8N6G6 1762 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 PALM3A6NDB9 673 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 MINDY4BA8MYZ0 360 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 E7EWF7 191 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 PRKAB2O43741 272 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 CHGBP05060 677 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 EPS15P42566 896 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 LIFRP42702 1097 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 HIRAP54198 1017 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 PCBP4P57723 403 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 FKBP1BP68106 108 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 GABPAQ06546 454 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 BECN1Q14457 450 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 PPP2R5BQ15173 497 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 NBPF9Q3BBW0 867 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 TATDN1Q6P1N9 297 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 LRRC69Q6ZNQ3 347 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 RUFY3Q7L099 469 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 ZNF444Q8N0Y2 327 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 JAKMIP1Q96N16 626 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 TTC14Q96N46 770 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 UBAC1Q9BSL1 405 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 DEFB129Q9H1M3 183 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 TSPAN10Q9H1Z9 355 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 SUV39H2Q9H5I1 410 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 SH2D4AQ9H788 454 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 MKNK2Q9HBH9 465 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 NEUROD4Q9HD90 331 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 DDX4Q9NQI0 724 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 TCP11L1Q9NUJ3 509 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
CDKN3-206ENST00000541304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
CDKN3-206ENST00000541304 CNTNAP1P78357 1384 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CLRN2A0PK11 232 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TSPY2A6NKD2 308 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TCP10L2B9ZVM9 353 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 PPP1R12BO60237 982 aaPredicted RBP6.72□□□□□ -1.33
CDKN3-206ENST00000541304 ASNSP08243 561 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TSPY3P0CV98 308 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TSPY8P0CW00 308 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CALM1P0DP23 149 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CALM2P0DP24 149 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CALM3P0DP25 149 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 PDIA4P13667 645 aaKnown RBP6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
CDKN3-206ENST00000541304 RPS6KB1P23443 525 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 FGD1P98174 961 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 NFIAQ12857 509 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 RASA3Q14644 834 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TMEM179Q6ZVK1 233 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 KRT26Q7Z3Y9 468 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 DGKHQ86XP1 1220 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TBC1D10CQ8IV04 446 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms