RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 FBXO27Q8NI29 283 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 IP6K1Q92551 441 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 VWCEQ96DN2 955 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 FAM84AQ96KN4 292 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 KREMEN1Q96MU8 473 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 COPRSQ9NQ92 184 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 SLAMF8Q9P0V8 285 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 TMEM59LQ9UK28 342 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 A0A1W2PP64 1363 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 CRB1P82279 1406 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 KRTAP4-8A0A0G2JLE6 195 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 RBM47A0AV96 593 aaKnown RBP7.81□□□□□ -1.16
SUDS3-202ENST00000541280 WASH4PA8MWX3 477 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 FYB1O15117 783 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 GRIN3BO60391 1043 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 ATE1O95260 518 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 DDB1Q16531 1140 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 CWF19L2Q2TBE0 894 aaKnown RBP7.81□□□□□ -1.16
SUDS3-202ENST00000541280 TMEM67Q5HYA8 995 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 BAHD1Q8TBE0 780 aaPredicted RBP7.81□□□□□ -1.16
SUDS3-202ENST00000541280 SUPT16HQ9Y5B9 1047 aaKnown RBP7.81□□□□□ -1.16
SUDS3-202ENST00000541280 CCDC7Q96M83 1385 aa7.81□□□□□ -1.16
SUDS3-202ENST00000541280 DNAJC25-GNG10A0A024R161 153 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 HPXP02790 462 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 EIF4A3P38919 411 aaKnown RBP7.8□□□□□ -1.16
SUDS3-202ENST00000541280 AMPHP49418 695 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 RALGPS1Q5JS13 557 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 CREG2Q8IUH2 290 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 GIPC2Q8TF65 315 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 LIN37Q96GY3 246 aaPredicted RBP7.8□□□□□ -1.16
SUDS3-202ENST00000541280 KLHL3Q9UH77 587 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 DUSP13Q9UII6 198 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 ITSN1Q15811 1721 aa7.8□□□□□ -1.16
SUDS3-202ENST00000541280 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
SUDS3-202ENST00000541280 ALS2Q96Q42 1657 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 COL14A1Q05707 1796 aaKnown RBP7.79□□□□□ -1.16
SUDS3-202ENST00000541280 SLIT3O75094 1523 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 DBX1A6NMT0 343 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 RGS13O14921 159 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 HSPA5P11021 654 aaKnown RBP7.79□□□□□ -1.16
SUDS3-202ENST00000541280 HMGB2P26583 209 aaKnown RBP7.79□□□□□ -1.16
SUDS3-202ENST00000541280 MLANAQ16655 118 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 KSR1Q8IVT5 923 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 SLC38A3Q99624 504 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 COL5A2P05997 1499 aaPredicted RBP7.79□□□□□ -1.16
SUDS3-202ENST00000541280 CD163L1Q9NR16 1453 aa7.79□□□□□ -1.16
SUDS3-202ENST00000541280 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 ARID1BQ8NFD5 2236 aaPredicted RBP7.78□□□□□ -1.16
SUDS3-202ENST00000541280 SLC22A31A6NKX4 558 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 LRRN2O75325 713 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 IL2RBP14784 551 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 RAC2P15153 192 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 HS2ST1Q7LGA3 356 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
SUDS3-202ENST00000541280 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 SP110Q9HB58 689 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 BRMS1Q9HCU9 246 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 GMIPQ9P107 970 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 KIF24Q5T7B8 1368 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 TOPAZ1Q8N9V7 1692 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 QRICH2Q9H0J4 1663 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 CAMTA1Q9Y6Y1 1673 aa7.78□□□□□ -1.16
SUDS3-202ENST00000541280 GLI3P10071 1580 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 PARD3Q8TEW0 1356 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 PLSCR1O15162 318 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 HOXC9P31274 260 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 TNNI2P48788 182 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 ZNF124Q15973 351 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 PKN1Q16512 942 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 CDCP2Q5VXM1 449 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 PHACTR4Q8IZ21 702 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 ABHD4Q8TB40 342 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 ENOX1Q8TC92 643 aaKnown RBP7.77□□□□□ -1.17
SUDS3-202ENST00000541280 KIF2CQ99661 725 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 BCL11AQ9H165 835 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 ADAMTS1Q9UHI8 967 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 GGT7Q9UJ14 662 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 ZNF281Q9Y2X9 895 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 PCDHB14Q9Y5E9 798 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.77□□□□□ -1.17
SUDS3-202ENST00000541280 NWD2Q9ULI1 1742 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 BCL9O00512 1426 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 MAP3K19Q56UN5 1328 aa7.77□□□□□ -1.17
SUDS3-202ENST00000541280 TLR3O15455 904 aaKnown RBP7.76□□□□□ -1.17
SUDS3-202ENST00000541280 UBOX5O94941 541 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 ZGLP1P0C6A0 271 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 CRKP46108 304 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 EGR3Q06889 387 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 LDLRAD1Q5T700 205 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 PRR23BQ6ZRT6 265 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 DEFB132Q7Z7B7 95 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 CILP2Q8IUL8 1156 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 REXO1Q8N1G1 1221 aaKnown RBP7.76□□□□□ -1.17
SUDS3-202ENST00000541280 PDZD8Q8NEN9 1154 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 PPP1R16BQ96T49 567 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 POLR3GLQ9BT43 218 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 ADAMTS10Q9H324 1103 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 PANK3Q9H999 370 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 PCDHA11Q9Y5I1 949 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms