RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 STXBP3O00186 592 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 BIN1O00499 593 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 PRPHP41219 470 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 WNT7BP56706 349 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 MORC3Q14149 939 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 SH3RF1Q7Z6J0 888 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 STAG2Q8N3U4 1231 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
LMO3-224ENST00000540848 ZDHHC15Q96MV8 337 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 C6orf50Q9HD87 102 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 MTMR4Q9NYA4 1195 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 SERTAD1Q9UHV2 236 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 SERPINB13Q9UIV8 391 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 IGKV6D-41A0A0C4DH26 115 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 MYL1P05976 194 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 KCNJ6P48051 423 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 ZNF174Q15697 407 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 WWC2Q6AWC2 1192 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 C2CD5Q86YS7 1000 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 ERCC4Q92889 916 aaPredicted RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 ZNF830Q96NB3 372 aaPredicted RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 RIOX1Q9H6W3 641 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 MAGEF1Q9HAY2 307 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 KCND1Q9NSA2 647 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 USP40Q9NVE5 1235 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 MAN1B1Q9UKM7 699 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 BAZ2BQ9UIF8 2168 aaKnown RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 GREB1LQ9C091 1923 aaPredicted RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 AXIN1O15169 862 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 CYTH3O43739 400 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 TTLL1O95922 423 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 FANCCQ00597 558 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 GRIN1Q05586 938 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 CTC1Q2NKJ3 1217 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
LMO3-224ENST00000540848 SOGA3Q5TF21 947 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 HEATR3Q7Z4Q2 680 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 CERS5Q8N5B7 392 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 PRR7Q8TB68 274 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
LMO3-224ENST00000540848 AK8Q96MA6 479 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
LMO3-224ENST00000540848 COL2A1P02458 1487 aaPredicted RBP11.49□□□□□ -0.57
LMO3-224ENST00000540848 VWA3AA6NCI4 1184 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 NAPAP54920 295 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 APOBEC3HQ6NTF7 200 aaKnown RBP11.49□□□□□ -0.57
LMO3-224ENST00000540848 FOXP4Q8IVH2 680 aaPredicted RBP11.49□□□□□ -0.57
LMO3-224ENST00000540848 IDI2Q9BXS1 227 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 GLT8D2Q9H1C3 349 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 CUEDC2Q9H467 287 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 GMPR2Q9P2T1 348 aaKnown RBP11.49□□□□□ -0.57
LMO3-224ENST00000540848 SERPINA10Q9UK55 444 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 PCDHA6Q9UN73 950 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 PCDHA8Q9Y5H6 950 aa11.49□□□□□ -0.57
LMO3-224ENST00000540848 PDHBP11177 359 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 MCM7P33993 719 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 CRKP46108 304 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 PICALMQ13492 652 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 NONOQ15233 471 aaKnown RBP eCLIP11.48□□□□□ -0.57
LMO3-224ENST00000540848 CDC42EP5Q6NZY7 148 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
LMO3-224ENST00000540848 DTHD1Q6ZMT9 781 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 CCDC112Q8NEF3 446 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 HPS1Q92902 700 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 GPKOWQ92917 476 aaPredicted RBP eCLIP11.48□□□□□ -0.57
LMO3-224ENST00000540848 DHX58Q96C10 678 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 PAGE5Q96GU1 130 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 XPO4Q9C0E2 1151 aaKnown RBP11.48□□□□□ -0.57
LMO3-224ENST00000540848 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 IFNKQ9P0W0 207 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 PYCARDQ9ULZ3 195 aa11.48□□□□□ -0.57
LMO3-224ENST00000540848 A0A087WWV3 80 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 KIF2AO00139 706 aaPredicted RBP11.47□□□□□ -0.57
LMO3-224ENST00000540848 SERPINC1P01008 464 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 TUBB4AP04350 444 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 CCNYL3P0C7X3 344 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 HOXA7P31268 230 aaPredicted RBP11.47□□□□□ -0.57
LMO3-224ENST00000540848 UBASH3AP57075 661 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 DPYDQ12882 1025 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 SLC15A2Q16348 729 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 CCDC144BQ3MJ40 725 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 PDILTQ8N807 584 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
LMO3-224ENST00000540848 EPSTI1Q96J88 318 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 CCSER1Q9C0I3 900 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
LMO3-224ENST00000540848 R3HCC1Q9Y3T6 440 aaKnown RBP11.47□□□□□ -0.57
LMO3-224ENST00000540848 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms