RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 COBLO75128 1261 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 PRCPP42785 496 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 SRLQ86TD4 932 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 TEX2Q8IWB9 1127 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 TXLNBQ8N3L3 684 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 IGSF22Q8N9C0 903 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 EHD4Q9H223 541 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 BIN2Q9UBW5 565 aaPredicted RBP12.7□□□□□ -0.38
LGR5-203ENST00000540815 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 ADCY7P51828 1080 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 EIF6P56537 245 aaKnown RBP12.7□□□□□ -0.38
LGR5-203ENST00000540815 NFIAQ12857 509 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 KRT31Q15323 416 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 ADSSL1Q8N142 457 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
LGR5-203ENST00000540815 JAKMIP3Q5VZ66 844 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 MRIQ9BWK5 157 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 NAA15Q9BXJ9 866 aaKnown RBP12.69□□□□□ -0.38
LGR5-203ENST00000540815 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 VPS18Q9P253 973 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 H7C1D1 291 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 PLCG1P19174 1290 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 CRKP46108 304 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 RBL2Q08999 1139 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 TCP11X2Q5H9J9 407 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 ZDHHC15Q96MV8 337 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 TMEM260Q9NX78 707 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
LGR5-203ENST00000540815 PNMA6FA0A0J9YX94 578 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 EDIL3O43854 480 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
LGR5-203ENST00000540815 KCNJ12Q14500 433 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 ICE2Q659A1 982 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
LGR5-203ENST00000540815 COA7Q96BR5 231 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
LGR5-203ENST00000540815 RABEP2Q9H5N1 569 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 MFAP3LO75121 409 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 STIM1Q13586 685 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
LGR5-203ENST00000540815 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
LGR5-203ENST00000540815 TOGARAM2Q6ZUX3 1019 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 ADGRF4Q8IZF3 695 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 CCDC51Q96ER9 411 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 CCDC17Q96LX7 622 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 MTMR9Q96QG7 549 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 PLIN2Q99541 437 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 TSPYL1Q9H0U9 437 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 JMJD4Q9H9V9 463 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 RIC8AQ9NPQ8 531 aa12.68□□□□□ -0.38
LGR5-203ENST00000540815 SHROOM1Q2M3G4 852 aaPredicted RBP12.67□□□□□ -0.38
LGR5-203ENST00000540815 ZNF622Q969S3 477 aaKnown RBP eCLIP12.67□□□□□ -0.38
LGR5-203ENST00000540815 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 PARD6BQ9BYG5 372 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 N4BP3O15049 544 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
LGR5-203ENST00000540815 TECP42680 631 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 CACNB3P54284 484 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 CNGA4Q8IV77 575 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 WDR24Q96S15 920 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 JRKLQ9Y4A0 524 aa12.67□□□□□ -0.38
LGR5-203ENST00000540815 PPP1R11O60927 126 aaPredicted RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 FECHP22830 423 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
LGR5-203ENST00000540815 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 TRIM14Q14142 442 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 CALCRLQ16602 461 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 CCDC47Q96A33 483 aaKnown RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 MTMR8Q96EF0 704 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 TRIM9Q9C026 710 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 PDE11AQ9HCR9 933 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 MAPK8IP1Q9UQF2 711 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 TNS1Q9HBL0 1735 aaKnown RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
LGR5-203ENST00000540815 PSMA7O14818 248 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 GYPCP04921 128 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 TPM1P09493 284 aa12.66□□□□□ -0.38
LGR5-203ENST00000540815 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms