RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SYNPO2Q9UMS6 1093 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 FECHP22830 423 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 MRPL12P52815 198 aaKnown RBP15.49■□□□□ 0.07
RTN3-210ENST00000540798 RASSF8Q8NHQ8 419 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
RTN3-210ENST00000540798 GTPBP4Q9BZE4 634 aaKnown RBP15.49■□□□□ 0.07
RTN3-210ENST00000540798 SEPT2Q15019 361 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 UBE2SQ16763 222 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 CNNM4Q6P4Q7 775 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 PRMT6Q96LA8 375 aaPredicted RBP15.48■□□□□ 0.07
RTN3-210ENST00000540798 PSMD1Q99460 953 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 PLIN2Q99541 437 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 TDRD3Q9H7E2 651 aaKnown RBP15.48■□□□□ 0.07
RTN3-210ENST00000540798 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 STK17AQ9UEE5 414 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 ADKP55263 362 aaKnown RBP15.48■□□□□ 0.07
RTN3-210ENST00000540798 ATP2B2Q01814 1243 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 QRICH1Q2TAL8 776 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 TSC1Q92574 1164 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 AKR1B15C9JRZ8 316 aaPredicted RBP15.48■□□□□ 0.07
RTN3-210ENST00000540798 PPIP5K2O43314 1243 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 GCFC2P16383 781 aaKnown RBP15.48■□□□□ 0.07
RTN3-210ENST00000540798 TXKP42681 527 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 ICA1Q05084 483 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 KIF18AQ8NI77 898 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 DHTKD1Q96HY7 919 aaPredicted RBP15.48■□□□□ 0.07
RTN3-210ENST00000540798 GMLQ99445 158 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 PSTPIP2Q9H939 334 aa15.48■□□□□ 0.07
RTN3-210ENST00000540798 KCNJ18B7U540 433 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 SLC1A4P43007 532 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 COPB1P53618 953 aaKnown RBP15.47■□□□□ 0.07
RTN3-210ENST00000540798 PMS1P54277 932 aaKnown RBP15.47■□□□□ 0.07
RTN3-210ENST00000540798 JAG1P78504 1218 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 KCNJ12Q14500 433 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 ABCB5Q2M3G0 1257 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 TMEM119Q4V9L6 283 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 TTI2Q6NXR4 508 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 TRIM65Q6PJ69 517 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 ANKRD7Q92527 254 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 HAS1Q92839 578 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 MBOAT7Q96N66 472 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 NAP1L4Q99733 375 aaKnown RBP15.47■□□□□ 0.07
RTN3-210ENST00000540798 THAP9Q9H5L6 903 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 LRWD1Q9UFC0 647 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 C21orf2O43822 256 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 COBLO75128 1261 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 RRP1BQ14684 758 aaKnown RBP15.47■□□□□ 0.07
RTN3-210ENST00000540798 TMEM266Q2M3C6 531 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 MTERF4Q7Z6M4 381 aaKnown RBP15.47■□□□□ 0.07
RTN3-210ENST00000540798 CRYGNQ8WXF5 182 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
RTN3-210ENST00000540798 PPP1R2P41236 205 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 TNNI2P48788 182 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 AMPD3Q01432 767 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 RBL2Q08999 1139 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 CDC37Q16543 378 aaPredicted RBP15.46■□□□□ 0.07
RTN3-210ENST00000540798 RSBN1LQ6PCB5 846 aaPredicted RBP15.46■□□□□ 0.07
RTN3-210ENST00000540798 ZSCAN29Q8IWY8 852 aaPredicted RBP15.46■□□□□ 0.07
RTN3-210ENST00000540798 IPO4Q8TEX9 1081 aaKnown RBP15.46■□□□□ 0.07
RTN3-210ENST00000540798 NAA15Q9BXJ9 866 aaKnown RBP15.46■□□□□ 0.07
RTN3-210ENST00000540798 L2HGDHQ9H9P8 463 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 CYP3A7-CYP3A51PA0A087WV96 503 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 F5H6K3 240 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 VIL1P09327 827 aaKnown RBP15.46■□□□□ 0.07
RTN3-210ENST00000540798 CYP3A7P24462 503 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 KLRC3Q07444 240 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 RAB34Q9BZG1 259 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 PPP2R2CQ9Y2T4 447 aa15.46■□□□□ 0.07
RTN3-210ENST00000540798 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 TRIM49BA6NDI0 452 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 ZSCAN12O43309 604 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 MFAP3LO75121 409 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 GYPCP04921 128 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 SPDYE6P0CI01 402 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 KCNA3P22001 575 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 EEF1GP26641 437 aaKnown RBP15.46■□□□□ 0.06
RTN3-210ENST00000540798 MMP14P50281 582 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 STIM1Q13586 685 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 CCDC93Q567U6 631 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 HYIQ5T013 277 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 RTKN2Q8IZC4 609 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 NOC3LQ8WTT2 800 aaKnown RBP15.46■□□□□ 0.06
RTN3-210ENST00000540798 CCDC51Q96ER9 411 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 TMEM51Q9NW97 253 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 DDX25Q9UHL0 483 aaKnown RBP15.46■□□□□ 0.06
RTN3-210ENST00000540798 MAPK8IP1Q9UQF2 711 aa15.46■□□□□ 0.06
RTN3-210ENST00000540798 PSMA7O14818 248 aa15.45■□□□□ 0.06
RTN3-210ENST00000540798 MOXD1Q6UVY6 613 aa15.45■□□□□ 0.06
RTN3-210ENST00000540798 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
RTN3-210ENST00000540798 DUSP9Q99956 384 aaKnown RBP15.45■□□□□ 0.06
RTN3-210ENST00000540798 HERC5Q9UII4 1024 aaKnown RBP15.45■□□□□ 0.06
RTN3-210ENST00000540798 SLC26A4O43511 780 aa15.45■□□□□ 0.06
RTN3-210ENST00000540798 GDF11O95390 407 aa15.45■□□□□ 0.06
RTN3-210ENST00000540798 NDUFB10O96000 172 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms