RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 LZTS2Q9BRK4 669 aa19.34■□□□□ 0.69
UBC-208ENST00000540700 SENP6Q9GZR1 1112 aaPredicted RBP19.34■□□□□ 0.69
UBC-208ENST00000540700 EYSQ5T1H1 3165 aa19.34■□□□□ 0.69
UBC-208ENST00000540700 TTC28Q96AY4 2481 aa19.33■□□□□ 0.69
UBC-208ENST00000540700 PLXNB2O15031 1838 aa19.33■□□□□ 0.69
UBC-208ENST00000540700 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
UBC-208ENST00000540700 ICAM1P05362 532 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 STAT3P40763 770 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 ATN1P54259 1190 aaPredicted RBP19.33■□□□□ 0.68
UBC-208ENST00000540700 PLS1Q14651 629 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 FAM109BQ6ICB4 259 aaPredicted RBP19.33■□□□□ 0.68
UBC-208ENST00000540700 SNRNP48Q6IEG0 339 aaKnown RBP19.33■□□□□ 0.68
UBC-208ENST00000540700 PLEKHH3Q7Z736 793 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 RIOX2Q8IUF8 465 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 CCDC83Q8IWF9 413 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 USP6NLQ92738 828 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 TMX3Q96JJ7 454 aa19.33■□□□□ 0.68
UBC-208ENST00000540700 ZBTB5O15062 677 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 FDX1P10109 184 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 IFNAR1P17181 557 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 ERCC3P19447 782 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 OAZ1P54368 228 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 PPP2R5BQ15173 497 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 PKN1Q16512 942 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 MORN1Q5T089 497 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 ZNF697Q5TEC3 545 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 APBA2Q99767 749 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 TEX13BQ9BXU2 312 aa19.32■□□□□ 0.68
UBC-208ENST00000540700 BAZ2BQ9UIF8 2168 aaKnown RBP19.32■□□□□ 0.68
UBC-208ENST00000540700 PRUNE2Q8WUY3 3088 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 SMCHD1A6NHR9 2005 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 CCDC196A0A1B0GTZ2 297 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 JAK2O60674 1132 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 SLC4A3P48751 1232 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 USH1GQ495M9 461 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 MUM1L1Q5H9M0 696 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 WDR78Q5VTH9 848 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 TYW1BQ6NUM6 668 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 NSUN7Q8NE18 718 aaKnown RBP19.31■□□□□ 0.68
UBC-208ENST00000540700 CLEC4DQ8WXI8 215 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 ZSCAN31Q96LW9 406 aaPredicted RBP19.31■□□□□ 0.68
UBC-208ENST00000540700 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
UBC-208ENST00000540700 V9GY48 417 aaPredicted RBP19.31■□□□□ 0.68
UBC-208ENST00000540700 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
UBC-208ENST00000540700 OPLAHO14841 1288 aa19.3■□□□□ 0.68
UBC-208ENST00000540700 FDPSP14324 419 aaKnown RBP19.3■□□□□ 0.68
UBC-208ENST00000540700 CNGA1P29973 690 aa19.3■□□□□ 0.68
UBC-208ENST00000540700 GPKOWQ92917 476 aaPredicted RBP eCLIP19.3■□□□□ 0.68
UBC-208ENST00000540700 SNX21Q969T3 373 aa19.3■□□□□ 0.68
UBC-208ENST00000540700 SLC26A6Q9BXS9 759 aa19.3■□□□□ 0.68
UBC-208ENST00000540700 HOMER2Q9NSB8 354 aa19.3■□□□□ 0.68
UBC-208ENST00000540700 SPTBN5Q9NRC6 3674 aaKnown RBP19.29■□□□□ 0.68
UBC-208ENST00000540700 NFIBO00712 420 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 PRPF3O43395 683 aaKnown RBP19.29■□□□□ 0.68
UBC-208ENST00000540700 ALAS1P13196 640 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 MCM2P49736 904 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 MAP2K5Q13163 448 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 MFSD14CQ5VZR4 134 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 WWC2Q6AWC2 1192 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 NCAPG2Q86XI2 1143 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 FBXO11Q86XK2 927 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 RRP36Q96EU6 259 aaKnown RBP19.29■□□□□ 0.68
UBC-208ENST00000540700 AIFM3Q96NN9 605 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 SH2B1Q9NRF2 756 aaPredicted RBP19.29■□□□□ 0.68
UBC-208ENST00000540700 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 FLRT1Q9NZU1 646 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 PRKAG2Q9UGJ0 569 aa19.29■□□□□ 0.68
UBC-208ENST00000540700 CTDP1Q9Y5B0 961 aaPredicted RBP19.29■□□□□ 0.68
UBC-208ENST00000540700 SHCBP1Q8NEM2 672 aa19.28■□□□□ 0.68
UBC-208ENST00000540700 TBC1D5Q92609 795 aa19.28■□□□□ 0.68
UBC-208ENST00000540700 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
UBC-208ENST00000540700 CDX2Q99626 313 aaPredicted RBP19.28■□□□□ 0.68
UBC-208ENST00000540700 RNF26Q9BY78 433 aaPredicted RBP19.28■□□□□ 0.68
UBC-208ENST00000540700 PTPDC1A2A3K4 754 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 CPLX1O14810 134 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 ADAMTS3O15072 1205 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 SLC25A27O95847 323 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 CUL4AQ13619 759 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 PFKFB3Q16875 520 aaPredicted RBP19.27■□□□□ 0.68
UBC-208ENST00000540700 MAFAQ8NHW3 353 aaPredicted RBP19.27■□□□□ 0.68
UBC-208ENST00000540700 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 AMNQ9BXJ7 453 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 DDX20Q9UHI6 824 aaKnown RBP19.27■□□□□ 0.68
UBC-208ENST00000540700 ATP11BQ9Y2G3 1177 aa19.27■□□□□ 0.68
UBC-208ENST00000540700 STXBP3O00186 592 aa19.26■□□□□ 0.67
UBC-208ENST00000540700 RTP1P59025 263 aa19.26■□□□□ 0.67
UBC-208ENST00000540700 CCNA1P78396 465 aa19.26■□□□□ 0.67
UBC-208ENST00000540700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.26■□□□□ 0.67
UBC-208ENST00000540700 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
UBC-208ENST00000540700 SEC63Q9UGP8 760 aaKnown RBP19.26■□□□□ 0.67
UBC-208ENST00000540700 PCDHA1Q9Y5I3 950 aa19.26■□□□□ 0.67
UBC-208ENST00000540700 ABCB11O95342 1321 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 K7ELQ4 463 aaPredicted RBP19.25■□□□□ 0.67
UBC-208ENST00000540700 SCG2P13521 617 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 PTPREP23469 700 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 CYP2C19P33261 490 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
UBC-208ENST00000540700 GRB14Q14449 540 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms