RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 DUSP28Q4G0W2 176 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 CXCL17Q6UXB2 119 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 PNMA1Q8ND90 353 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 RGS22Q8NE09 1264 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 DNERQ8NFT8 737 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 GUCD1Q96NT3 240 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 PURBQ96QR8 312 aaKnown RBP19.59■□□□□ 0.73
PSMD3-204ENST00000540504 KRT23Q9C075 422 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 KAT14Q9H8E8 782 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 CNNM2Q9H8M5 875 aa19.59■□□□□ 0.73
PSMD3-204ENST00000540504 TMEM265A0A087WTH1 108 aa19.58■□□□□ 0.72
PSMD3-204ENST00000540504 RBM47A0AV96 593 aaKnown RBP19.58■□□□□ 0.72
PSMD3-204ENST00000540504 B4DLN1 442 aa19.58■□□□□ 0.72
PSMD3-204ENST00000540504 CD4P01730 458 aa19.58■□□□□ 0.72
PSMD3-204ENST00000540504 MRPL12P52815 198 aaKnown RBP19.58■□□□□ 0.72
PSMD3-204ENST00000540504 RPS6P62753 249 aaKnown RBP19.58■□□□□ 0.72
PSMD3-204ENST00000540504 SLC30A10Q6XR72 485 aa19.58■□□□□ 0.72
PSMD3-204ENST00000540504 TMEM199Q8N511 208 aa19.58■□□□□ 0.72
PSMD3-204ENST00000540504 ZSCAN10Q96SZ4 725 aaPredicted RBP19.58■□□□□ 0.72
PSMD3-204ENST00000540504 DDX49Q9Y6V7 483 aaKnown RBP19.58■□□□□ 0.72
PSMD3-204ENST00000540504 B4E1Z4 1266 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 CALML3P27482 149 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 ITGA7Q13683 1181 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 ASPRV1Q53RT3 343 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 WDR11Q9BZH6 1224 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 SEMA6BQ9H3T3 888 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 ZSWIM5Q9P217 1185 aa19.57■□□□□ 0.72
PSMD3-204ENST00000540504 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.56■□□□□ 0.72
PSMD3-204ENST00000540504 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.56■□□□□ 0.72
PSMD3-204ENST00000540504 NKRFO15226 690 aaKnown RBP eCLIP19.56■□□□□ 0.72
PSMD3-204ENST00000540504 GOLGA8HP0CJ92 632 aa19.56■□□□□ 0.72
PSMD3-204ENST00000540504 EDNRBP24530 442 aa19.56■□□□□ 0.72
PSMD3-204ENST00000540504 PDE4DQ08499 809 aa19.56■□□□□ 0.72
PSMD3-204ENST00000540504 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
PSMD3-204ENST00000540504 POLR3EQ9NVU0 708 aa19.56■□□□□ 0.72
PSMD3-204ENST00000540504 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
PSMD3-204ENST00000540504 RAD50Q92878 1312 aa19.55■□□□□ 0.72
PSMD3-204ENST00000540504 CPT1AP50416 773 aa19.55■□□□□ 0.72
PSMD3-204ENST00000540504 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.55■□□□□ 0.721e-6■□□□□ 10.4
PSMD3-204ENST00000540504 UBAC1Q9BSL1 405 aa19.55■□□□□ 0.72
PSMD3-204ENST00000540504 UBA5Q9GZZ9 404 aa19.55■□□□□ 0.72
PSMD3-204ENST00000540504 GRIN2DO15399 1336 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 TNKSO95271 1327 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 ABCB11O95342 1321 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 CDC37Q16543 378 aaPredicted RBP19.54■□□□□ 0.72
PSMD3-204ENST00000540504 USH1GQ495M9 461 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 BRDTQ58F21 947 aaPredicted RBP19.54■□□□□ 0.72
PSMD3-204ENST00000540504 TMEM63BQ5T3F8 832 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 PSRC1Q6PGN9 363 aaPredicted RBP19.54■□□□□ 0.72
PSMD3-204ENST00000540504 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 SCFD2Q8WU76 684 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 CDX2Q99626 313 aaPredicted RBP19.54■□□□□ 0.72
PSMD3-204ENST00000540504 PPP1R12CQ9BZL4 782 aa19.54■□□□□ 0.72
PSMD3-204ENST00000540504 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
PSMD3-204ENST00000540504 CSF2RAP15509 400 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 PTGS1P23219 599 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 PPP2R5BQ15173 497 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 TMEM240Q5SV17 173 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 TTYH1Q9H313 450 aaPredicted RBP19.53■□□□□ 0.72
PSMD3-204ENST00000540504 CPVLQ9H3G5 476 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 HIPK3Q9H422 1215 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 MYH6P13533 1939 aa19.53■□□□□ 0.72
PSMD3-204ENST00000540504 DLL1O00548 723 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 KPNA6O60684 536 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 GSPT1P15170 499 aaKnown RBP19.52■□□□□ 0.72
PSMD3-204ENST00000540504 PDE4AP27815 886 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 IFIT1BQ5T764 474 aaKnown RBP19.52■□□□□ 0.72
PSMD3-204ENST00000540504 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 C16orf59Q7L2K0 433 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 MCF2L2Q86YR7 1114 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 IL23AQ9NPF7 189 aa19.52■□□□□ 0.72
PSMD3-204ENST00000540504 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
PSMD3-204ENST00000540504 B4GALT4O60513 344 aa19.51■□□□□ 0.71
PSMD3-204ENST00000540504 SUPT20HL2P0C7V6 817 aa19.51■□□□□ 0.71
PSMD3-204ENST00000540504 CYP2C18P33260 490 aa19.51■□□□□ 0.71
PSMD3-204ENST00000540504 PSMC6P62333 389 aa19.51■□□□□ 0.71
PSMD3-204ENST00000540504 PURAQ00577 322 aaKnown RBP19.51■□□□□ 0.71
PSMD3-204ENST00000540504 MTG1Q9BT17 334 aaPredicted RBP19.51■□□□□ 0.71
PSMD3-204ENST00000540504 IL25Q9H293 177 aa19.51■□□□□ 0.71
PSMD3-204ENST00000540504 MTIF3Q9H2K0 278 aaKnown RBP19.51■□□□□ 0.71
PSMD3-204ENST00000540504 MRPL11Q9Y3B7 192 aaKnown RBP19.51■□□□□ 0.71
PSMD3-204ENST00000540504 DHX16O60231 1041 aaKnown RBP19.5■□□□□ 0.71
PSMD3-204ENST00000540504 DNAJB2P25686 324 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 TRDNQ13061 729 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 TTLL4Q14679 1199 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 SEC23AQ15436 765 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 QRICH1Q2TAL8 776 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 ZNF365Q70YC5 407 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 FBXO11Q86XK2 927 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 NSUN6Q8TEA1 469 aaKnown RBP19.5■□□□□ 0.71
PSMD3-204ENST00000540504 IWS1Q96ST2 819 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 NOC4LQ9BVI4 516 aaKnown RBP19.5■□□□□ 0.71
PSMD3-204ENST00000540504 ALDH8A1Q9H2A2 487 aaPredicted RBP19.5■□□□□ 0.71
PSMD3-204ENST00000540504 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
PSMD3-204ENST00000540504 U3KPZ7 1027 aaPredicted RBP19.5■□□□□ 0.71
PSMD3-204ENST00000540504 A6NJR5 290 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms