RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 KIAA0895Q8NCT3 520 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 NOC3LQ8WTT2 800 aaKnown RBP13.88□□□□□ -0.19
NEK6-213ENST00000540326 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
NEK6-213ENST00000540326 GDAP1L1Q96MZ0 367 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 PIGSQ96S52 555 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 MMTAG2Q9BU76 263 aaKnown RBP13.88□□□□□ -0.19
NEK6-213ENST00000540326 UBA5Q9GZZ9 404 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 CUEDC2Q9H467 287 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 C6orf50Q9HD87 102 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 RPS6KA4O75676 772 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 CDK8P49336 464 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
NEK6-213ENST00000540326 WDR93Q6P2C0 686 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 C7orf25Q9BPX7 421 aa13.88□□□□□ -0.19
NEK6-213ENST00000540326 BTDP43251 543 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 USP14P54578 494 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 GSTO1P78417 241 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 NUP58Q9BVL2 599 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 SPZ1Q9BXG8 430 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 IDEP14735 1019 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 GNA11P29992 359 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 HSP90B2PQ58FF3 399 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 TMED8Q6PL24 325 aaPredicted RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 IPO4Q8TEX9 1081 aaKnown RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 LZTS2Q9BRK4 669 aa13.87□□□□□ -0.19
NEK6-213ENST00000540326 RTFDC1Q9BY42 306 aaPredicted RBP13.87□□□□□ -0.19
NEK6-213ENST00000540326 EIF3CLB5ME19 914 aaKnown RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 ZNF263O14978 683 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 TNNT3P45378 269 aaPredicted RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 PPP4CP60510 307 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 FAM114A1Q8IWE2 563 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 RETREG2Q8NC44 543 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 EIF3CQ99613 913 aaKnown RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 MAGEF1Q9HAY2 307 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 FAM207AQ9NSI2 230 aaPredicted RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 LRWD1Q9UFC0 647 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 USP17L5A8MUK1 530 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 PDE2AO00408 941 aaPredicted RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 EPHB6O15197 1021 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 TUBBP07437 444 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 CAPN2P17655 700 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 AMPD3Q01432 767 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 CNNM4Q6P4Q7 775 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
NEK6-213ENST00000540326 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
NEK6-213ENST00000540326 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 CCDC96Q2M329 555 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 FKBP15Q5T1M5 1219 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 ZNF804AQ7Z570 1209 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 ZSCAN29Q8IWY8 852 aaPredicted RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 GSPT2Q8IYD1 628 aaKnown RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 TEX11Q8IYF3 940 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 ZNF287Q9HBT7 754 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 SNED1Q8TER0 1413 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 NAV1Q8NEY1 1877 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 LDHCP07864 332 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 SEMA3FQ13275 785 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 MSL3Q8N5Y2 521 aaKnown RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 COA7Q96BR5 231 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 DRC1Q96MC2 740 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 ERGIC2Q96RQ1 377 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 BLOC1S4Q9NUP1 217 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
NEK6-213ENST00000540326 GOLGB1Q14789 3259 aaKnown RBP13.85□□□□□ -0.19
NEK6-213ENST00000540326 POTEMA6NI47 508 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 MYMKA6NI61 221 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 GRB10Q13322 594 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 GRAPQ13588 217 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 SPA17Q15506 151 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
NEK6-213ENST00000540326 ZNF662Q6ZS27 426 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms