RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 HNRNPH2P55795 449 aaKnown RBP15.27■□□□□ 0.04
BNIP3-202ENST00000540159 SNAP25P60880 206 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 GRAPQ13588 217 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 PTPROQ16827 1216 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 CEP112Q8N8E3 955 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
BNIP3-202ENST00000540159 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 KBTBD4Q9NVX7 518 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 ARID5AQ03989 594 aa15.27■□□□□ 0.03
BNIP3-202ENST00000540159 DPP8Q6V1X1 898 aaPredicted RBP15.27■□□□□ 0.03
BNIP3-202ENST00000540159 KCTD1Q719H9 257 aa15.27■□□□□ 0.03
BNIP3-202ENST00000540159 KCNK18Q7Z418 384 aa15.27■□□□□ 0.03
BNIP3-202ENST00000540159 REXO1Q8N1G1 1221 aaKnown RBP15.27■□□□□ 0.03
BNIP3-202ENST00000540159 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.03
BNIP3-202ENST00000540159 GIMAP8Q8ND71 665 aaPredicted RBP15.27■□□□□ 0.03
BNIP3-202ENST00000540159 RIN2Q8WYP3 895 aaPredicted RBP15.27■□□□□ 0.03
BNIP3-202ENST00000540159 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.03
BNIP3-202ENST00000540159 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.03
BNIP3-202ENST00000540159 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 CCDC96Q2M329 555 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 C2CD5Q86YS7 1000 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 P2RX5Q93086 422 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 MMTAG2Q9BU76 263 aaKnown RBP15.26■□□□□ 0.03
BNIP3-202ENST00000540159 NHEJ1Q9H9Q4 299 aaPredicted RBP15.26■□□□□ 0.03
BNIP3-202ENST00000540159 C6orf50Q9HD87 102 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
BNIP3-202ENST00000540159 GNAQP50148 359 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 DOK7Q18PE1 504 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 LRWD1Q9UFC0 647 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 ITIH6Q6UXX5 1313 aa15.26■□□□□ 0.03
BNIP3-202ENST00000540159 AKR1B1P15121 316 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 BEND6Q5SZJ8 279 aaPredicted RBP15.25■□□□□ 0.03
BNIP3-202ENST00000540159 PRR5LQ6MZQ0 368 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
BNIP3-202ENST00000540159 NELFCDQ8IXH7 590 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 MLXIPQ9HAP2 919 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 NLRC4Q9NPP4 1024 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 POLLQ9UGP5 575 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 SCN7AQ01118 1682 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 CCDC151A5D8V7 595 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 MYMKA6NI61 221 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 RHOBTB3O94955 611 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 C2orf54Q08AI8 447 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 CALCRLQ16602 461 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 LRRC4BQ9NT99 713 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.25■□□□□ 0.03
BNIP3-202ENST00000540159 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 IPO7O95373 1038 aaKnown RBP15.25■□□□□ 0.03
BNIP3-202ENST00000540159 CYP2C19P33261 490 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 TCP10Q12799 353 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 DNAAF5Q86Y56 855 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 ZNF507Q8TCN5 953 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 RABEP2Q9H5N1 569 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 CNTNAP4Q9C0A0 1308 aa15.25■□□□□ 0.03
BNIP3-202ENST00000540159 NAP1L1P55209 391 aaKnown RBP15.24■□□□□ 0.03
BNIP3-202ENST00000540159 BARGINQ6ZT62 677 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 SNX29Q8TEQ0 813 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 CCDC51Q96ER9 411 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 CALML4Q96GE6 196 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 ZMYND12Q9H0C1 365 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 DEF6Q9H4E7 631 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 ZNHIT6Q9NWK9 470 aaKnown RBP15.24■□□□□ 0.03
BNIP3-202ENST00000540159 ADAM21Q9UKJ8 722 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 MYH10P35580 1976 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 NPHP3-ACAD11A0A0J9YXS1 232 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 LRRIQ3A6PVS8 624 aaPredicted RBP15.24■□□□□ 0.03
BNIP3-202ENST00000540159 RNASE9P60153 205 aaKnown RBP15.24■□□□□ 0.03
BNIP3-202ENST00000540159 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.24■□□□□ 0.03
BNIP3-202ENST00000540159 GGA1Q9UJY5 639 aa15.24■□□□□ 0.03
BNIP3-202ENST00000540159 ANKRD65E5RJM6 399 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 FGFBP2Q9BYJ0 223 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 PDS5AQ29RF7 1337 aaKnown RBP15.23■□□□□ 0.03
BNIP3-202ENST00000540159 PDE2AO00408 941 aaPredicted RBP15.23■□□□□ 0.03
BNIP3-202ENST00000540159 ZNF263O14978 683 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 NCK2O43639 380 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 BUB1O43683 1085 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 CCNE1P24864 410 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 DNM2P50570 870 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 GSTO1P78417 241 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 EZH2Q15910 746 aaKnown RBP15.23■□□□□ 0.03
BNIP3-202ENST00000540159 ECM1Q16610 540 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 TMED8Q6PL24 325 aaPredicted RBP15.23■□□□□ 0.03
BNIP3-202ENST00000540159 SLC30A10Q6XR72 485 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 RRAGAQ7L523 313 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 CCDC42Q96M95 316 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 DDX4Q9NQI0 724 aaKnown RBP15.23■□□□□ 0.03
BNIP3-202ENST00000540159 CAPN11Q9UMQ6 739 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L15C9J2P7 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L13C9JLJ4 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L11C9JVI0 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L18D6R9N7 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L22D6RA61 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L17D6RBQ6 530 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms