RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 UPF2Q9HAU5 1272 aaKnown RBP25.53■■□□□ 1.68
TRIM65-202ENST00000540128 PLXNA1Q9UIW2 1896 aa25.53■■□□□ 1.68
TRIM65-202ENST00000540128 SNAI1O95863 264 aaPredicted RBP25.52■■□□□ 1.68
TRIM65-202ENST00000540128 MYCP01106 439 aaPredicted RBP25.52■■□□□ 1.68
TRIM65-202ENST00000540128 CYBAP13498 195 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 CAPN2P17655 700 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 AK2P54819 239 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 SLC30A10Q6XR72 485 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 TRPV1Q8NER1 839 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 MORC4Q8TE76 937 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 LARP6Q9BRS8 491 aaKnown RBP25.52■■□□□ 1.68
TRIM65-202ENST00000540128 V9GY48 417 aaPredicted RBP25.52■■□□□ 1.68
TRIM65-202ENST00000540128 ASTN1O14525 1302 aa25.52■■□□□ 1.68
TRIM65-202ENST00000540128 ASB14A6NK59 587 aa25.51■■□□□ 1.67
TRIM65-202ENST00000540128 CALML3P27482 149 aa25.51■■□□□ 1.67
TRIM65-202ENST00000540128 HSD17B4P51659 736 aa25.51■■□□□ 1.67
TRIM65-202ENST00000540128 SYTL5Q8TDW5 730 aaPredicted RBP25.51■■□□□ 1.67
TRIM65-202ENST00000540128 PURBQ96QR8 312 aaKnown RBP25.51■■□□□ 1.67
TRIM65-202ENST00000540128 ADD3Q9UEY8 706 aaKnown RBP25.51■■□□□ 1.67
TRIM65-202ENST00000540128 TPCN1Q9ULQ1 816 aa25.51■■□□□ 1.67
TRIM65-202ENST00000540128 IFNAR1P17181 557 aa25.5■■□□□ 1.67
TRIM65-202ENST00000540128 CCND3P30281 292 aaPredicted RBP25.5■■□□□ 1.67
TRIM65-202ENST00000540128 GJA8P48165 433 aa25.5■■□□□ 1.67
TRIM65-202ENST00000540128 DNERQ8NFT8 737 aa25.5■■□□□ 1.67
TRIM65-202ENST00000540128 hCG_1642624A0A1W2PR95 340 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 POTEFA5A3E0 1075 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 PRPF3O43395 683 aaKnown RBP25.49■■□□□ 1.67
TRIM65-202ENST00000540128 SGPL1O95470 568 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 CCT2P78371 535 aaKnown RBP25.49■■□□□ 1.67
TRIM65-202ENST00000540128 PRAMEF19Q5SWL8 479 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 ARMCX2Q7L311 632 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 IL27Q8NEV9 243 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 TBC1D32Q96NH3 1257 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 CRISPLD2Q9H0B8 497 aa25.49■■□□□ 1.67
TRIM65-202ENST00000540128 NCOA5Q9HCD5 579 aaKnown RBP25.49■■□□□ 1.67
TRIM65-202ENST00000540128 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.49■■□□□ 1.67
TRIM65-202ENST00000540128 PFKFB2O60825 505 aa25.48■■□□□ 1.67
TRIM65-202ENST00000540128 ZNF865P0CJ78 1059 aaPredicted RBP25.48■■□□□ 1.67
TRIM65-202ENST00000540128 ALDH5A1P51649 535 aaPredicted RBP25.48■■□□□ 1.67
TRIM65-202ENST00000540128 SOX10P56693 466 aa25.48■■□□□ 1.67
TRIM65-202ENST00000540128 DEFB118Q96PH6 123 aa25.48■■□□□ 1.67
TRIM65-202ENST00000540128 ABHD16BQ9H3Z7 469 aa25.48■■□□□ 1.67
TRIM65-202ENST00000540128 COL20A1Q9P218 1284 aa25.48■■□□□ 1.67
TRIM65-202ENST00000540128 RBM27Q9P2N5 1060 aaKnown RBP25.48■■□□□ 1.67
TRIM65-202ENST00000540128 CNPY2Q9Y2B0 182 aa25.48■■□□□ 1.67
TRIM65-202ENST00000540128 GCOM1H8Y6P7 765 aaPredicted RBP25.47■■□□□ 1.67
TRIM65-202ENST00000540128 hCG_1984214I3L0E3 225 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 CFBP00751 764 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 POLR2MP0CAP2 368 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 LHX8Q68G74 356 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 TEX2Q8IWB9 1127 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 ZNF713Q8N859 430 aaPredicted RBP25.47■■□□□ 1.67
TRIM65-202ENST00000540128 U2AF1L4Q8WU68 220 aaKnown RBP25.47■■□□□ 1.67
TRIM65-202ENST00000540128 KATNBL1Q9H079 304 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 LCTP09848 1927 aa25.47■■□□□ 1.67
TRIM65-202ENST00000540128 PIK3CDO00329 1044 aa25.46■■□□□ 1.67
TRIM65-202ENST00000540128 SEPT4O43236 478 aa25.46■■□□□ 1.67
TRIM65-202ENST00000540128 MSCO60682 206 aa25.46■■□□□ 1.67
TRIM65-202ENST00000540128 EDNRBP24530 442 aa25.46■■□□□ 1.67
TRIM65-202ENST00000540128 RABEP1Q15276 862 aa25.46■■□□□ 1.67
TRIM65-202ENST00000540128 PFKFB3Q16875 520 aaPredicted RBP25.46■■□□□ 1.67
TRIM65-202ENST00000540128 TAAR1Q96RJ0 339 aa25.46■■□□□ 1.67
TRIM65-202ENST00000540128 RNF26Q9BY78 433 aaPredicted RBP25.46■■□□□ 1.67
TRIM65-202ENST00000540128 SLKQ9H2G2 1235 aaPredicted RBP25.46■■□□□ 1.67
TRIM65-202ENST00000540128 RBBP6Q7Z6E9 1792 aaKnown RBP25.46■■□□□ 1.67
TRIM65-202ENST00000540128 EN2P19622 333 aaPredicted RBP25.45■■□□□ 1.66
TRIM65-202ENST00000540128 RGS19P49795 217 aa25.45■■□□□ 1.66
TRIM65-202ENST00000540128 SCRN1Q12765 414 aa25.45■■□□□ 1.66
TRIM65-202ENST00000540128 ACVR2BQ13705 512 aa25.45■■□□□ 1.66
TRIM65-202ENST00000540128 PKN1Q16512 942 aa25.45■■□□□ 1.66
TRIM65-202ENST00000540128 WWC2Q6AWC2 1192 aa25.45■■□□□ 1.66
TRIM65-202ENST00000540128 NSUN6Q8TEA1 469 aaKnown RBP25.45■■□□□ 1.66
TRIM65-202ENST00000540128 DDX20Q9UHI6 824 aaKnown RBP25.45■■□□□ 1.66
TRIM65-202ENST00000540128 B4DLN1 442 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 CAPN15O75808 1086 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 SCG2P13521 617 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 MRPL12P52815 198 aaKnown RBP25.44■■□□□ 1.66
TRIM65-202ENST00000540128 STK3Q13188 491 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 PPP1R18Q6NYC8 613 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 HEATR3Q7Z4Q2 680 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 GPKOWQ92917 476 aaPredicted RBP eCLIP25.44■■□□□ 1.66
TRIM65-202ENST00000540128 PHKBQ93100 1093 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 SHISA4Q96DD7 197 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 IWS1Q96ST2 819 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 PSTPIP2Q9H939 334 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 BARHL2Q9NY43 387 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 OGDHLQ9ULD0 1010 aa25.44■■□□□ 1.66
TRIM65-202ENST00000540128 MEIS2O14770 477 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 CPLX1O14810 134 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 CNGA1P29973 690 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 HOXA13P31271 388 aaPredicted RBP25.43■■□□□ 1.66
TRIM65-202ENST00000540128 ME3Q16798 604 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 TYW1BQ6NUM6 668 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 CPLX2Q6PUV4 134 aaKnown RBP25.43■■□□□ 1.66
TRIM65-202ENST00000540128 RMDN3Q96TC7 470 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 MPHOSPH6Q99547 160 aaKnown RBP25.43■■□□□ 1.66
TRIM65-202ENST00000540128 MCM3APO60318 1980 aa25.43■■□□□ 1.66
TRIM65-202ENST00000540128 CENPFP49454 3210 aa25.42■■□□□ 1.66
TRIM65-202ENST00000540128 STXBP3O00186 592 aa25.42■■□□□ 1.66
TRIM65-202ENST00000540128 SLC26A6Q9BXS9 759 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms