RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 KIF5BP33176 963 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 ADCYAP1R1P41586 468 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 GJA9P57773 515 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 EXOSC10Q01780 885 aaKnown RBP12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 TRAF1Q13077 416 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 KRT32Q14532 448 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 IQSEC1Q6DN90 963 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 TAPT1Q6NXT6 567 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 SLC39A5Q6ZMH5 540 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 MAP3K20Q9NYL2 800 aaKnown RBP12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 GNEQ9Y223 722 aaKnown RBP12.57□□□□□ -0.4
SLC3A2-215ENST00000539891 RBM47A0AV96 593 aaKnown RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 MOXD2PA6NHM9 499 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 B4DLN1 442 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 EPB41L2O43491 1005 aaKnown RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 CALM1P0DP23 149 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 CALM2P0DP24 149 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 CALM3P0DP25 149 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 HSPA4P34932 840 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 MRPL12P52815 198 aaKnown RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 SGMS1Q86VZ5 419 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 FBXO16Q8IX29 292 aaPredicted RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 PIGSQ96S52 555 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 LZTS2Q9BRK4 669 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 SPC25Q9HBM1 224 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 Q9Y3F1 56 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 PCDHA1Q9Y5I3 950 aa12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 DDX49Q9Y6V7 483 aaKnown RBP12.56□□□□□ -0.4
SLC3A2-215ENST00000539891 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 A0A1W2PQ45 241 aaPredicted RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 A0A1W2PQY0 241 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 OPLAHO14841 1288 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 CTAGE5O15320 804 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 REC8O95072 547 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 GNAQP50148 359 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 HSD17B4P51659 736 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 ACLYP53396 1101 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 ADCK5Q3MIX3 580 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 NFXL1Q6ZNB6 911 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 PCSK9Q8NBP7 692 aaKnown RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 SYTL5Q8TDW5 730 aaPredicted RBP12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 PDGFCQ9NRA1 345 aa12.55□□□□□ -0.4
SLC3A2-215ENST00000539891 LTBP2Q14767 1821 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 SMPD1P17405 629 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 RTP1P59025 263 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 PDE4DQ08499 809 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 KCNA10Q16322 511 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 DUSP28Q4G0W2 176 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 HABP4Q5JVS0 413 aaKnown RBP12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 FERMT2Q96AC1 680 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 IWS1Q96ST2 819 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 MYL10Q9BUA6 226 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 COL20A1Q9P218 1284 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 SLC12A7Q9Y666 1083 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
SLC3A2-215ENST00000539891 BMP8BP34820 402 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 GNASQ5JWF2 1037 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 TLK2Q86UE8 772 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 GDF15Q99988 308 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 ELP1O95163 1332 aa12.53□□□□□ -0.4
SLC3A2-215ENST00000539891 A0A1W2PPC1 479 aa12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 CFBP00751 764 aa12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 ASGR1P07306 291 aa12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 SYN1P17600 705 aa12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 APOA5Q6Q788 366 aa12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.41
SLC3A2-215ENST00000539891 SCFD2Q8WU76 684 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms