RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PPP4R3AQ6IN85 833 aa25.36■■□□□ 1.65
HOMER3-204ENST00000539827 TRIML1Q8N9V2 468 aa25.36■■□□□ 1.65
HOMER3-204ENST00000539827 AK8Q96MA6 479 aa25.36■■□□□ 1.65
HOMER3-204ENST00000539827 FBXO28Q9NVF7 368 aa25.36■■□□□ 1.65
HOMER3-204ENST00000539827 DDX25Q9UHL0 483 aaKnown RBP25.36■■□□□ 1.65
HOMER3-204ENST00000539827 CTNND1O60716 968 aaKnown RBP25.36■■□□□ 1.65
HOMER3-204ENST00000539827 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.36■■□□□ 1.65
HOMER3-204ENST00000539827 IKBKBO14920 756 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 GTPBP6O43824 516 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-204ENST00000539827 CUL4BQ13620 913 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 NAALADL2Q58DX5 795 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 FAM160B2Q86V87 743 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 APOBEC3FQ8IUX4 373 aaKnown RBP25.35■■□□□ 1.65
HOMER3-204ENST00000539827 DRC7Q8IY82 874 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 ZNF830Q96NB3 372 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-204ENST00000539827 FEM1BQ9UK73 627 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 OPLAHO14841 1288 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 HIRAP54198 1017 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-204ENST00000539827 TPM4P67936 248 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 MLKLQ8NB16 471 aa25.35■■□□□ 1.65
HOMER3-204ENST00000539827 RANBP17Q9H2T7 1088 aaKnown RBP25.35■■□□□ 1.65
HOMER3-204ENST00000539827 SBF1O95248 1867 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 SMCHD1A6NHR9 2005 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 AP3B2Q13367 1082 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 DGKZQ13574 1117 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 DCAF15Q66K64 600 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 IGSF22Q8N9C0 903 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 LRRC15Q8TF66 581 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 GGA3Q9NZ52 723 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 FZD1Q9UP38 647 aa25.34■■□□□ 1.65
HOMER3-204ENST00000539827 PLA2G6O60733 806 aa25.33■■□□□ 1.65
HOMER3-204ENST00000539827 HOXA13P31271 388 aaPredicted RBP25.33■■□□□ 1.65
HOMER3-204ENST00000539827 MYL5Q02045 173 aa25.33■■□□□ 1.65
HOMER3-204ENST00000539827 GJA10Q969M2 543 aa25.33■■□□□ 1.65
HOMER3-204ENST00000539827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.33■■□□□ 1.65
HOMER3-204ENST00000539827 GCFC2P16383 781 aaKnown RBP25.33■■□□□ 1.64
HOMER3-204ENST00000539827 PLCG1P19174 1290 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 LMOD1P29536 600 aaPredicted RBP25.33■■□□□ 1.64
HOMER3-204ENST00000539827 TMEM266Q2M3C6 531 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 GSDMAQ96QA5 445 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 UIMC1Q96RL1 719 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 MMTAG2Q9BU76 263 aaKnown RBP25.33■■□□□ 1.64
HOMER3-204ENST00000539827 LRWD1Q9UFC0 647 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 DACH1Q9UI36 760 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 ZKSCAN5Q9Y2L8 839 aa25.33■■□□□ 1.64
HOMER3-204ENST00000539827 MARCH6O60337 910 aa25.32■■□□□ 1.64
HOMER3-204ENST00000539827 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
HOMER3-204ENST00000539827 FXR2P51116 673 aaKnown RBP eCLIP25.32■■□□□ 1.64
HOMER3-204ENST00000539827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.32■■□□□ 1.64
HOMER3-204ENST00000539827 NAP1L4Q99733 375 aaKnown RBP25.32■■□□□ 1.64
HOMER3-204ENST00000539827 SYT17Q9BSW7 474 aa25.32■■□□□ 1.64
HOMER3-204ENST00000539827 GINM1Q9NU53 330 aa25.32■■□□□ 1.64
HOMER3-204ENST00000539827 MSNP26038 577 aaKnown RBP25.31■■□□□ 1.64
HOMER3-204ENST00000539827 USP11P51784 963 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 FMR1Q06787 632 aaKnown RBP eCLIP25.31■■□□□ 1.64
HOMER3-204ENST00000539827 HAS1Q92839 578 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 HSD3B7Q9H2F3 369 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 RNF181Q9P0P0 153 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 SPDYE3A6NKU9 549 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 ARHGAP4P98171 946 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
HOMER3-204ENST00000539827 TTC12Q9H892 705 aaPredicted RBP25.31■■□□□ 1.64
HOMER3-204ENST00000539827 POTEMA6NI47 508 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 GOLGA6L6A8MZA4 724 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 CDC25BP30305 580 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 MCTP2Q6DN12 878 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 ZKSCAN4Q969J2 545 aaPredicted RBP25.3■■□□□ 1.64
HOMER3-204ENST00000539827 MRFAP1L1Q96HT8 127 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 KIAA1683Q9H0B3 1180 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 NRBP1Q9UHY1 535 aa25.3■■□□□ 1.64
HOMER3-204ENST00000539827 FOSP01100 380 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 CD44P16070 742 aaKnown RBP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 TRAF1Q13077 416 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 TRMT44Q8IYL2 757 aaKnown RBP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 SMYD4Q8IYR2 804 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 WRNIP1Q96S55 665 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 ZNF112Q9UJU3 913 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 WDR46O15213 610 aaKnown RBP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 CFBP00751 764 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 RPN1P04843 607 aaKnown RBP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 YBX3P16989 372 aaKnown RBP eCLIP25.29■■□□□ 1.64
HOMER3-204ENST00000539827 FCHSD1Q86WN1 690 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 CRYGNQ8WXF5 182 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 CALML4Q96GE6 196 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 FANCLQ9NW38 375 aa25.29■■□□□ 1.64
HOMER3-204ENST00000539827 ATP1A3P13637 1013 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 MTMR2Q13614 643 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 PDIA5Q14554 519 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 LDHDQ86WU2 507 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 SCYL3Q8IZE3 742 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 RAB34Q9BZG1 259 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 IFNKQ9P0W0 207 aa25.28■■□□□ 1.64
HOMER3-204ENST00000539827 CYP3A7-CYP3A51PA0A087WV96 503 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 CYP3A7P24462 503 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 GRB10Q13322 594 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 KLHL10Q6JEL2 608 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 LPAR1Q92633 364 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 HOOK2Q96ED9 719 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 MBOAT7Q96N66 472 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 PNMA5Q96PV4 448 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms