RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 H3BQV1 296 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 TNPO2O14787 897 aaKnown RBP17.7■□□□□ 0.42
DDB1-216ENST00000539739 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
DDB1-216ENST00000539739 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 KRT40Q6A162 431 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 FBXO18Q8NFZ0 1043 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 A1CFQ9NQ94 594 aaKnown RBP17.7■□□□□ 0.42
DDB1-216ENST00000539739 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
DDB1-216ENST00000539739 SLC15A5A6NIM6 579 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 OPLAHO14841 1288 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 ECM2O94769 699 aaPredicted RBP17.69■□□□□ 0.42
DDB1-216ENST00000539739 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
DDB1-216ENST00000539739 PTPREP23469 700 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 ZNF296Q8WUU4 475 aaPredicted RBP17.69■□□□□ 0.42
DDB1-216ENST00000539739 GJB4Q9NTQ9 266 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 CYP39A1Q9NYL5 469 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 PIK3CDO00329 1044 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 RPS6P62753 249 aaKnown RBP17.69■□□□□ 0.42
DDB1-216ENST00000539739 GUCY1B3Q02153 619 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 GHRHRQ02643 423 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 BAATQ14032 418 aaPredicted RBP17.69■□□□□ 0.42
DDB1-216ENST00000539739 TBC1D5Q92609 795 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
DDB1-216ENST00000539739 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
DDB1-216ENST00000539739 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
DDB1-216ENST00000539739 MMP1P03956 469 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 HOXD10P28358 340 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 HSD17B4P51659 736 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 USP17L6PQ6QN14 398 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 BLIDQ8IZY5 108 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
DDB1-216ENST00000539739 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 CD99L2Q8TCZ2 262 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 NUDT12Q9BQG2 462 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 SLC5A4Q9NY91 659 aa17.68■□□□□ 0.42
DDB1-216ENST00000539739 POTEB2H3BUK9 544 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 MEIS2O14770 477 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 GNRH1P01148 92 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
DDB1-216ENST00000539739 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
DDB1-216ENST00000539739 ADORA2AP29274 412 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 HOXA13P31271 388 aaPredicted RBP17.67■□□□□ 0.42
DDB1-216ENST00000539739 KRT2P35908 639 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
DDB1-216ENST00000539739 GRB14Q14449 540 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 DPP9Q86TI2 863 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 TRIM47Q96LD4 638 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 ARHGAP39Q9C0H5 1083 aa17.67■□□□□ 0.42
DDB1-216ENST00000539739 SPDYE3A6NKU9 549 aa17.66■□□□□ 0.42
DDB1-216ENST00000539739 FOSP01100 380 aaPredicted RBP17.66■□□□□ 0.42
DDB1-216ENST00000539739 SYT1P21579 422 aa17.66■□□□□ 0.42
DDB1-216ENST00000539739 UBE2SQ16763 222 aa17.66■□□□□ 0.42
DDB1-216ENST00000539739 SLC30A10Q6XR72 485 aa17.66■□□□□ 0.42
DDB1-216ENST00000539739 FCHSD1Q86WN1 690 aa17.66■□□□□ 0.42
DDB1-216ENST00000539739 SYTL5Q8TDW5 730 aaPredicted RBP17.66■□□□□ 0.42
DDB1-216ENST00000539739 BIN2Q9UBW5 565 aaPredicted RBP17.66■□□□□ 0.42
DDB1-216ENST00000539739 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
DDB1-216ENST00000539739 PGK2P07205 417 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 CTGFP29279 349 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 CTCFP49711 727 aaPredicted RBP17.65■□□□□ 0.42
DDB1-216ENST00000539739 AP3B2Q13367 1082 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 MORN1Q5T089 497 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
DDB1-216ENST00000539739 EHMT1Q9H9B1 1298 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
DDB1-216ENST00000539739 FOXN1O15353 648 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 STX6O43752 255 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 RGS2P41220 211 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 CLK2P49760 499 aaKnown RBP17.65■□□□□ 0.42
DDB1-216ENST00000539739 MAP2K5Q13163 448 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 NPY5RQ15761 445 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 JAKMIP3Q5VZ66 844 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
DDB1-216ENST00000539739 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 BTBD18B2RXH4 712 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 PDE4CQ08493 712 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 FAM133AQ8N9E0 248 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 DNERQ8NFT8 737 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 MPHOSPH6Q99547 160 aaKnown RBP17.64■□□□□ 0.41
DDB1-216ENST00000539739 FOXP1Q9H334 677 aaPredicted RBP17.64■□□□□ 0.41
DDB1-216ENST00000539739 GJD2Q9UKL4 321 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
DDB1-216ENST00000539739 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
DDB1-216ENST00000539739 CCDC194A0A1B0GVG4 234 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 B4DLN1 442 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 HSPA8P11142 646 aaKnown RBP17.63■□□□□ 0.41
DDB1-216ENST00000539739 CNTN2Q02246 1040 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 RASGRP4Q8TDF6 673 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
DDB1-216ENST00000539739 NSUN6Q8TEA1 469 aaKnown RBP17.63■□□□□ 0.41
DDB1-216ENST00000539739 TAAR1Q96RJ0 339 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms