RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ADRB1P08588 477 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 COL6A1P12109 1028 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 HSPA6P17066 643 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 ETFBP38117 255 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 CDKN1CP49918 316 aaPredicted RBP4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 FCGRTP55899 365 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 APOBRQ0VD83 1088 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 SYCP2LQ5T4T6 812 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 SV2BQ7L1I2 683 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 LILRB2Q8N423 598 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 MFSD4AQ8N468 514 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 KCT2Q8NC54 265 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 CXorf38Q8TB03 319 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 COPRSQ9NQ92 184 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 MAP3K20Q9NYL2 800 aaKnown RBP4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 ATP8A1Q9Y2Q0 1164 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 MSRB2Q9Y3D2 182 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 UACAQ9BZF9 1416 aa4.8□□□□□ -1.64
AC055720.1-201ENST00000539552 ABCA9Q8IUA7 1624 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 NRDCO43847 1150 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 ZNF500O60304 480 aaPredicted RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 PMLP29590 882 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 RAPGEF1Q13905 1077 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 GRM2Q14416 872 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 MAP3K11Q16584 847 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 EFCAB2Q5VUJ9 269 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 FBXW10Q5XX13 1052 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 DEFB132Q7Z7B7 95 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 BAHD1Q8TBE0 780 aaPredicted RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 ZNF296Q8WUU4 475 aaPredicted RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 HNRNPLLQ8WVV9 542 aaKnown RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 NKD1Q969G9 470 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 SYTL4Q96C24 671 aaPredicted RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 ARPC5LQ9BPX5 153 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 NT5C1AQ9BXI3 368 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 SRRTQ9BXP5 876 aaKnown RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 EMILIN2Q9BXX0 1053 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 INO80BQ9C086 356 aaPredicted RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 CCDC113Q9H0I3 377 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 TMX4Q9H1E5 349 aaPredicted RBP4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 C19orf73Q9NVV2 129 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 RTEL1Q9NZ71 1219 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 SAMM50Q9Y512 469 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 PCDHGC5Q9Y5F6 944 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 NEO1Q92859 1461 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 FHOD3Q2V2M9 1422 aa4.79□□□□□ -1.64
AC055720.1-201ENST00000539552 JCADQ9P266 1359 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 SZT2Q5T011 3432 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 TOP2AP11388 1531 aaKnown RBP4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 ALG1L2C9J202 215 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 KCNQ2O43526 872 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 SEMA7AO75326 666 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 ALDH1L1O75891 902 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 HK2P52789 917 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 TTF1Q15361 905 aaPredicted RBP4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 SFRP5Q5T4F7 317 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 PPP4R4Q6NUP7 873 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 FERD3LQ96RJ6 166 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 DNAJC7Q99615 494 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 SLC6A17Q9H1V8 727 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 GINM1Q9NU53 330 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 TMEM39AQ9NV64 488 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 PRKAG3Q9UGI9 489 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 NRBP1Q9UHY1 535 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 COL6A3P12111 3177 aa4.78□□□□□ -1.64
AC055720.1-201ENST00000539552 ANP32CO43423 234 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 BPNT1O95861 308 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 MCM4P33991 863 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 EIF6P56537 245 aaKnown RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 DLG4P78352 724 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 POU5F1Q01860 360 aaKnown RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 SQSTM1Q13501 440 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 ZXDCQ2QGD7 858 aaPredicted RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 TKFCQ3LXA3 575 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 ZC3H12AQ5D1E8 599 aaKnown RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 MAP1SQ66K74 1059 aaPredicted RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 FAM214BQ7L5A3 538 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 THAP5Q7Z6K1 395 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 ZNF605Q86T29 641 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 GGNQ86UU5 652 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 JAMLQ86YT9 394 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 SYNPOQ8N3V7 929 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 DNAJC5GQ8N7S2 189 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 MARCH10Q8NA82 808 aaPredicted RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 RUNDC1Q96C34 613 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 KCNC2Q96PR1 638 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 PAGR1Q9BTK6 254 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 CBX8Q9HC52 389 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 CHST12Q9NRB3 414 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 ADAMTS1Q9UHI8 967 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 TMEM59LQ9UK28 342 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 PLAAQ9Y263 795 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 BLMP54132 1417 aaPredicted RBP4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 PHLDB1Q86UU1 1377 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 ROBO2Q9HCK4 1378 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 NINLQ9Y2I6 1382 aa4.77□□□□□ -1.65
AC055720.1-201ENST00000539552 TMEM238LA0A1B0GVL6 79 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms