RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 FITM1A5D6W6 292 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 RTP1P59025 263 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 RSPO2Q6UXX9 243 aaPredicted RBP9.5□□□□□ -0.89
TRAV11-201ENST00000539512 KIAA0907Q7Z7F0 614 aaPredicted RBP9.5□□□□□ -0.89
TRAV11-201ENST00000539512 MTDHQ86UE4 582 aaKnown RBP9.5□□□□□ -0.89
TRAV11-201ENST00000539512 KREMEN2Q8NCW0 462 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 PDZD8Q8NEN9 1154 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 HHIPL1Q96JK4 782 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 ZFYVE21Q9BQ24 234 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 GPR27Q9NS67 375 aa9.5□□□□□ -0.89
TRAV11-201ENST00000539512 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRAV11-201ENST00000539512 WTIPA6NIX2 430 aaPredicted RBP9.49□□□□□ -0.89
TRAV11-201ENST00000539512 HYAL3O43820 417 aaPredicted RBP9.49□□□□□ -0.89
TRAV11-201ENST00000539512 PABPC4Q13310 644 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRAV11-201ENST00000539512 TKFCQ3LXA3 575 aa9.49□□□□□ -0.89
TRAV11-201ENST00000539512 STYK1Q6J9G0 422 aa9.49□□□□□ -0.89
TRAV11-201ENST00000539512 IFNL3Q8IZI9 196 aa9.49□□□□□ -0.89
TRAV11-201ENST00000539512 LINC01599Q8WXQ3 324 aa9.49□□□□□ -0.89
TRAV11-201ENST00000539512 ALG1Q9BT22 464 aa9.49□□□□□ -0.89
TRAV11-201ENST00000539512 BTG4Q9NY30 223 aa9.49□□□□□ -0.89
TRAV11-201ENST00000539512 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
TRAV11-201ENST00000539512 GTF2A2P52657 109 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 GYS2P54840 703 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 GPR85P60893 370 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 RPL11P62913 178 aaKnown RBP9.48□□□□□ -0.89
TRAV11-201ENST00000539512 CYP4F3Q08477 520 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 NTRK3Q16288 839 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 MAGEB10Q96LZ2 347 aaPredicted RBP9.48□□□□□ -0.89
TRAV11-201ENST00000539512 TMX1Q9H3N1 280 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 RC3H2Q9HBD1 1191 aaKnown RBP9.48□□□□□ -0.89
TRAV11-201ENST00000539512 ZNF281Q9Y2X9 895 aa9.48□□□□□ -0.89
TRAV11-201ENST00000539512 TIMM13Q9Y5L4 95 aaPredicted RBP9.48□□□□□ -0.89
TRAV11-201ENST00000539512 ANKRD62A6NC57 917 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 FADS2P1A8MWK0 482 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 GDNFP39905 211 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 CBX2Q14781 532 aaPredicted RBP9.47□□□□□ -0.89
TRAV11-201ENST00000539512 TESK1Q15569 626 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 ZNF792Q3KQV3 632 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 DENND5AQ6IQ26 1287 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 KCNT2Q6UVM3 1135 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRAV11-201ENST00000539512 USP33Q8TEY7 942 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 NINJ1Q92982 152 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 MFSD3Q96ES6 412 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 G6PC3Q9BUM1 346 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 SLC52A2Q9HAB3 445 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 TMEFF2Q9UIK5 374 aaPredicted RBP9.47□□□□□ -0.89
TRAV11-201ENST00000539512 PRKAB1Q9Y478 270 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 TRAF6Q9Y4K3 522 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 PCDHA2Q9Y5H9 948 aa9.47□□□□□ -0.89
TRAV11-201ENST00000539512 RFPL3O75679 317 aa9.46□□□□□ -0.9
TRAV11-201ENST00000539512 C6orf222P0C671 652 aaPredicted RBP9.46□□□□□ -0.9
TRAV11-201ENST00000539512 GUCY1A3Q02108 690 aa9.46□□□□□ -0.9
TRAV11-201ENST00000539512 KIZQ2M2Z5 673 aa9.46□□□□□ -0.9
TRAV11-201ENST00000539512 ZFP64Q9NPA5 681 aa9.46□□□□□ -0.9
TRAV11-201ENST00000539512 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
TRAV11-201ENST00000539512 GPR160Q9UJ42 338 aa9.46□□□□□ -0.9
TRAV11-201ENST00000539512 FLT3P36888 993 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 TRIM61Q5EBN2 209 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 ARTNQ5T4W7 220 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 BRAPQ7Z569 592 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 CABP7Q86V35 215 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 CCDC103Q8IW40 242 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
TRAV11-201ENST00000539512 RCBTB1Q8NDN9 531 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 NUP43Q8NFH3 380 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 MYLIPQ8WY64 445 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 JMJD8Q96S16 334 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 MAGEC2Q9UBF1 373 aaPredicted RBP9.45□□□□□ -0.9
TRAV11-201ENST00000539512 NPFFR2Q9Y5X5 522 aa9.45□□□□□ -0.9
TRAV11-201ENST00000539512 C7orf72A4D263 438 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 IRS4O14654 1257 aaPredicted RBP9.44□□□□□ -0.9
TRAV11-201ENST00000539512 OPA1O60313 960 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 RNASE1P07998 156 aaKnown RBP9.44□□□□□ -0.9
TRAV11-201ENST00000539512 ARL4AP40617 200 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 GP2P55259 537 aaKnown RBP9.44□□□□□ -0.9
TRAV11-201ENST00000539512 LSAMPQ13449 338 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 INF2Q27J81 1249 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 HSF5Q4G112 596 aaPredicted RBP9.44□□□□□ -0.9
TRAV11-201ENST00000539512 NFXL1Q6ZNB6 911 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 SLCO6A1Q86UG4 719 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 LILRA2Q8N149 483 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 IMPACTQ9P2X3 320 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 ADAMTS6Q9UKP5 1117 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 SBNO2Q9Y2G9 1366 aa9.44□□□□□ -0.9
TRAV11-201ENST00000539512 LCP1P13796 627 aa9.43□□□□□ -0.9
TRAV11-201ENST00000539512 AFMP43652 599 aa9.43□□□□□ -0.9
TRAV11-201ENST00000539512 CORO7P57737 925 aa9.43□□□□□ -0.9
TRAV11-201ENST00000539512 DALRD3Q5D0E6 543 aaKnown RBP9.43□□□□□ -0.9
TRAV11-201ENST00000539512 LBX2Q6XYB7 198 aa9.43□□□□□ -0.9
TRAV11-201ENST00000539512 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
TRAV11-201ENST00000539512 ZC3H7AQ8IWR0 971 aaKnown RBP9.43□□□□□ -0.9
TRAV11-201ENST00000539512 LZTR1Q8N653 840 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms