RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CCDC144BQ3MJ40 725 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L6PQ6QN14 398 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 RAB34Q9BZG1 259 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 VCPKMTQ9H867 229 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 DDX25Q9UHL0 483 aaKnown RBP23.02■■□□□ 1.28
DDX55-205ENST00000538744 KIAA1755Q5JYT7 1200 aa23.01■■□□□ 1.27
DDX55-205ENST00000538744 FAM83BQ5T0W9 1011 aa23.01■■□□□ 1.27
DDX55-205ENST00000538744 ANO3Q9BYT9 981 aa23.01■■□□□ 1.27
DDX55-205ENST00000538744 GJA3Q9Y6H8 435 aa23.01■■□□□ 1.27
DDX55-205ENST00000538744 EGFRP00533 1210 aa23■■□□□ 1.27
DDX55-205ENST00000538744 RPN1P04843 607 aaKnown RBP23■■□□□ 1.27
DDX55-205ENST00000538744 PLCG1P19174 1290 aa23■■□□□ 1.27
DDX55-205ENST00000538744 USH1GQ495M9 461 aa23■■□□□ 1.27
DDX55-205ENST00000538744 CALML4Q96GE6 196 aa23■■□□□ 1.27
DDX55-205ENST00000538744 KBTBD4Q9NVX7 518 aa23■■□□□ 1.27
DDX55-205ENST00000538744 IMPACTQ9P2X3 320 aa23■■□□□ 1.27
DDX55-205ENST00000538744 LRWD1Q9UFC0 647 aa23■■□□□ 1.27
DDX55-205ENST00000538744 CNOT7Q9UIV1 285 aaKnown RBP23■■□□□ 1.27
DDX55-205ENST00000538744 NFE2L3Q9Y4A8 694 aa23■■□□□ 1.27
DDX55-205ENST00000538744 MEIS2O14770 477 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 SERPINC1P01008 464 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 USP11P51784 963 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 PRELPP51888 382 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 PDIA5Q14554 519 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 TRMT44Q8IYL2 757 aaKnown RBP22.99■■□□□ 1.27
DDX55-205ENST00000538744 CHURC1Q8WUH1 139 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 TEPSINQ96N21 525 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 SYNRGQ9UMZ2 1314 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 PLA2G6O60733 806 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 CD44P16070 742 aaKnown RBP22.99■■□□□ 1.27
DDX55-205ENST00000538744 SEMA3FQ13275 785 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 NLGN2Q8NFZ4 835 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 PLIN2Q99541 437 aa22.99■■□□□ 1.27
DDX55-205ENST00000538744 PPP1R3GB7ZBB8 358 aa22.98■■□□□ 1.27
DDX55-205ENST00000538744 FOSP01100 380 aaPredicted RBP22.98■■□□□ 1.27
DDX55-205ENST00000538744 UBASH3AP57075 661 aa22.98■■□□□ 1.27
DDX55-205ENST00000538744 SAMD7Q7Z3H4 446 aa22.98■■□□□ 1.27
DDX55-205ENST00000538744 FAM160B2Q86V87 743 aa22.98■■□□□ 1.27
DDX55-205ENST00000538744 TEX2Q8IWB9 1127 aa22.98■■□□□ 1.27
DDX55-205ENST00000538744 UPF1Q92900 1129 aaKnown RBP eCLIP22.98■■□□□ 1.27
DDX55-205ENST00000538744 MMTAG2Q9BU76 263 aaKnown RBP22.98■■□□□ 1.27
DDX55-205ENST00000538744 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.98■■□□□ 1.27
DDX55-205ENST00000538744 PHF20L1A8MW92 1017 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 ZNF18P17022 549 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 GSDMDP57764 484 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 TBC1D10BQ4KMP7 808 aaPredicted RBP22.97■■□□□ 1.27
DDX55-205ENST00000538744 ZNF658Q5TYW1 1059 aaPredicted RBP22.97■■□□□ 1.27
DDX55-205ENST00000538744 MOXD1Q6UVY6 613 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 FILIP1Q7Z7B0 1213 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 KIAA1524Q8TCG1 905 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 MED15Q96RN5 788 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 GINM1Q9NU53 330 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 PYCARDQ9ULZ3 195 aa22.97■■□□□ 1.27
DDX55-205ENST00000538744 GOLGB1Q14789 3259 aaKnown RBP22.97■■□□□ 1.27
DDX55-205ENST00000538744 CYP3A7-CYP3A51PA0A087WV96 503 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 CYP3A7P24462 503 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 KCNB1Q14721 858 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 ZYXQ15942 572 aaKnown RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 KIF4BQ2VIQ3 1234 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 SPATA1Q5VX52 437 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 KLHL10Q6JEL2 608 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 SMYD4Q8IYR2 804 aaPredicted RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 CACTINQ8WUQ7 758 aaKnown RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 SCAF8Q9UPN6 1271 aaKnown RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 SPDYE3A6NKU9 549 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 MARCH6O60337 910 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 LRMPQ12912 555 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 DHX8Q14562 1220 aaKnown RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 TMC6Q7Z403 805 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 LRRC15Q8TF66 581 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 MBOAT7Q96N66 472 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 RANBP17Q9H2T7 1088 aaKnown RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 STK17AQ9UEE5 414 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 HACL1Q9UJ83 578 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 FEM1BQ9UK73 627 aa22.96■■□□□ 1.27
DDX55-205ENST00000538744 DICER1Q9UPY3 1922 aaKnown RBP22.96■■□□□ 1.27
DDX55-205ENST00000538744 ZNF541Q9H0D2 1346 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 OFD1O75665 1012 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 CDK11BP21127 795 aaKnown RBP22.95■■□□□ 1.26
DDX55-205ENST00000538744 LRRC8AQ8IWT6 810 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 CRYGNQ8WXF5 182 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 HAS1Q92839 578 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 CDK5RAP3Q96JB5 506 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 FEZ1Q99689 392 aa22.95■■□□□ 1.26
DDX55-205ENST00000538744 PIK3CDO00329 1044 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 ARHGAP4P98171 946 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 AMPD3Q01432 767 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 GRB10Q13322 594 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 NOLC1Q14978 699 aaKnown RBP eCLIP22.94■■□□□ 1.26
DDX55-205ENST00000538744 KRT79Q5XKE5 535 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 KIFC2Q96AC6 838 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 ZNF341Q9BYN7 854 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 GLIS2Q9BZE0 524 aaPredicted RBP22.94■■□□□ 1.26
DDX55-205ENST00000538744 CTNND2Q9UQB3 1225 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 ASTN2O75129 1339 aaPredicted RBP22.94■■□□□ 1.26
DDX55-205ENST00000538744 POTEMA6NI47 508 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 OPLAHO14841 1288 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 CCDC47Q96A33 483 aaKnown RBP22.94■■□□□ 1.26
DDX55-205ENST00000538744 C7orf25Q9BPX7 421 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms