RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 CCDC13Q8IYE1 715 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 N4BP2L2Q92802 583 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 HYOU1Q9Y4L1 999 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 TJP1Q07157 1748 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 PPP1R12AO14974 1030 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 NR1D1P20393 614 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 KRT2P35908 639 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 PAK2Q13177 524 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 HSP90AB3PQ58FF7 597 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 PPP4R3AQ6IN85 833 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 C8orf74Q6P047 294 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 CCDC121Q6ZUS5 278 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 NLRP14Q86W24 1093 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 MREGQ8N565 214 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 TBC1D22AQ8WUA7 517 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 RNF14Q9UBS8 474 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 A0A1B0GUA9 196 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 CASP1P29466 404 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 ADORA1P30542 326 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 SLC8A1P32418 973 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 MDH1P40925 334 aaKnown RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 CBLBQ13191 982 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 P3H4Q92791 437 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 ZNF512BQ96KM6 892 aaPredicted RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 CCT8L2Q96SF2 557 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 RNF26Q9BY78 433 aaPredicted RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 LACRTQ9GZZ8 138 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 TSKSQ9UJT2 592 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 DENND2AQ9ULE3 1009 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 XDHP47989 1333 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 MACROD2A1Z1Q3 448 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 UBE2Q2LH0YL09 131 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 KIF3CO14782 793 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 RPN1P04843 607 aaKnown RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 SRGNP10124 158 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 TRIM21P19474 475 aaKnown RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 ATP1A2P50993 1020 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 PDAP1Q13442 181 aaKnown RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 WTAPQ15007 396 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 NUP188Q5SRE5 1749 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 TIAM2Q8IVF5 1701 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 TEX11Q8IYF3 940 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 IQCKQ8N0W5 287 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 MYCBPAPQ8TBZ2 947 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 RNPC3Q96LT9 517 aaKnown RBP10□□□□□ -0.81
SNHG1-209ENST00000538654 CCDC114Q96M63 670 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 FAM161BQ96MY7 647 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 GOPCQ9HD26 462 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 SLC40A1Q9NP59 571 aa10□□□□□ -0.81
SNHG1-209ENST00000538654 A0A1W2PQJ5 194 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 PES1O00541 588 aaKnown RBP9.99□□□□□ -0.81
SNHG1-209ENST00000538654 RRM1P23921 792 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 HDLBPQ00341 1268 aaKnown RBP9.99□□□□□ -0.81
SNHG1-209ENST00000538654 SCARF1Q14162 830 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 FIGNQ5HY92 759 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 HAUS3Q68CZ6 603 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 ARMC9Q7Z3E5 817 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 WDR75Q8IWA0 830 aaKnown RBP9.99□□□□□ -0.81
SNHG1-209ENST00000538654 HDAC7Q8WUI4 952 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.99□□□□□ -0.816e-13■■□□□ 14.1
SNHG1-209ENST00000538654 RAPGEF4Q8WZA2 1011 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 ATP6V1G3Q96LB4 118 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 CCDC42Q96M95 316 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 OSBPL9Q96SU4 736 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 CENPOQ9BU64 300 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 CARD10Q9BWT7 1032 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 PUS3Q9BZE2 481 aaKnown RBP9.99□□□□□ -0.81
SNHG1-209ENST00000538654 EXOC1Q9NV70 894 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 SOS2Q07890 1332 aaPredicted RBP9.99□□□□□ -0.81
SNHG1-209ENST00000538654 PKD1L3Q7Z443 1732 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 MYH2Q9UKX2 1941 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 GOLGA6L10A6NI86 522 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 AKNAD1Q5T1N1 836 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 LRCH2Q5VUJ6 765 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 PDXDC2PQ6P474 469 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 C6orf89Q6UWU4 347 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 MFSD6Q6ZSS7 791 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 FAM114A1Q8IWE2 563 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 MTMR14Q8NCE2 650 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 NAPBQ9H115 298 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 VPS54Q9P1Q0 977 aa9.99□□□□□ -0.81
SNHG1-209ENST00000538654 AKAP11Q9UKA4 1901 aa9.98□□□□□ -0.81
SNHG1-209ENST00000538654 RCCD1A6NED2 376 aa9.98□□□□□ -0.81
SNHG1-209ENST00000538654 HOXD11P31277 338 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-209ENST00000538654 PRCPP42785 496 aa9.98□□□□□ -0.81
SNHG1-209ENST00000538654 ATP2C1P98194 919 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms