RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 SSU72Q9NP77 194 aaKnown RBP11.29□□□□□ -0.6
CD9-207ENST00000538418 ABCA8O94911 1581 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 GAS7O60861 476 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 SNUPNO95149 360 aaKnown RBP11.28□□□□□ -0.6
CD9-207ENST00000538418 EPXP11678 715 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 TRIM27P14373 513 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 HSP90AB4PQ58FF6 505 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 ARMCX6Q7L4S7 300 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 PIDD1Q9HB75 910 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 PNMA8BQ9ULN7 279 aaPredicted RBP11.28□□□□□ -0.6
CD9-207ENST00000538418 GPR55Q9Y2T6 319 aaPredicted RBP11.28□□□□□ -0.6
CD9-207ENST00000538418 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
CD9-207ENST00000538418 ARAP3Q8WWN8 1544 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 GFRA3O60609 400 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 ADH5P11766 374 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 PDE6BP35913 854 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
CD9-207ENST00000538418 LSSP48449 732 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 ERVK-21P61565 698 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 AMPD2Q01433 879 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 CYP4F3Q08477 520 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 DUOXA2Q1HG44 320 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 NBPF9Q3BBW0 867 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 INAVAQ3KP66 663 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 MINDY4Q4G0A6 757 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 C10orf62Q5T681 223 aaPredicted RBP11.27□□□□□ -0.61
CD9-207ENST00000538418 DENND5AQ6IQ26 1287 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 ILDR2Q71H61 639 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.61
CD9-207ENST00000538418 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.61
CD9-207ENST00000538418 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
CD9-207ENST00000538418 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
CD9-207ENST00000538418 CCDC189A1A4V9 331 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 MEGF11A6BM72 1044 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 VAMP4O75379 141 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 ULK1O75385 1050 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 KREMEN2Q8NCW0 462 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 DCAF11Q8TEB1 546 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 FBXL18Q96ME1 805 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 CYP4F12Q9HCS2 524 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 EMC7Q9NPA0 242 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 ZKSCAN5Q9Y2L8 839 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 EEA1Q15075 1411 aa11.26□□□□□ -0.61
CD9-207ENST00000538418 DEAF1O75398 565 aaPredicted RBP11.25□□□□□ -0.61
CD9-207ENST00000538418 MT-CO1P00395 513 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
CD9-207ENST00000538418 NBPF7P0C2Y1 421 aaPredicted RBP11.25□□□□□ -0.61
CD9-207ENST00000538418 PF4V1P10720 104 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 MORC3Q14149 939 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 NUTM2GQ5VZR2 741 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.25□□□□□ -0.61
CD9-207ENST00000538418 USP33Q8TEY7 942 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 ZFYVE21Q9BQ24 234 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 SARGQ9BW04 601 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
CD9-207ENST00000538418 SF3B6Q9Y3B4 125 aaKnown RBP11.25□□□□□ -0.61
CD9-207ENST00000538418 ATP10BO94823 1461 aa11.25□□□□□ -0.61
CD9-207ENST00000538418 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 KRBA1A5PL33 1030 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 HMGB1P1B2RPK0 211 aaPredicted RBP11.24□□□□□ -0.61
CD9-207ENST00000538418 FZD9O00144 591 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 TRAF5O00463 557 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 FOSP01100 380 aaPredicted RBP11.24□□□□□ -0.61
CD9-207ENST00000538418 ITIH2P19823 946 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 OCRLQ01968 901 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
CD9-207ENST00000538418 ZC3H7AQ8IWR0 971 aaKnown RBP11.24□□□□□ -0.61
CD9-207ENST00000538418 SMYD4Q8IYR2 804 aaPredicted RBP11.24□□□□□ -0.61
CD9-207ENST00000538418 CPA6Q8N4T0 437 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 RNF141Q8WVD5 230 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 AHCYL2Q96HN2 611 aaKnown RBP11.24□□□□□ -0.61
CD9-207ENST00000538418 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 VTA1Q9NP79 307 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 CABP5Q9NP86 173 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
CD9-207ENST00000538418 ARVCFO00192 962 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 DLL1O00548 723 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 ASPAP45381 313 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 RECQLP46063 649 aaPredicted RBP11.23□□□□□ -0.61
CD9-207ENST00000538418 SCRN1Q12765 414 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 KLF1Q13351 362 aaPredicted RBP11.23□□□□□ -0.61
CD9-207ENST00000538418 RGL3Q3MIN7 710 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 TMEM240Q5SV17 173 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 RSPO2Q6UXX9 243 aaPredicted RBP11.23□□□□□ -0.61
CD9-207ENST00000538418 C11orf74Q86VG3 221 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 IFNL3Q8IZI9 196 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
CD9-207ENST00000538418 PJA1Q8NG27 643 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 PHF20Q9BVI0 1012 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 MAF1Q9H063 256 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms