RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RNF146Q9NTX7 359 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 CNPY2Q9Y2B0 182 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 LOC285556D6RIA3 1793 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 KIF28PB7ZC32 967 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 BTBD19C9JJ37 291 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 COPB2P35606 906 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 USP17L6PQ6QN14 398 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 BRI3BPQ8WY22 251 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 NAP1L4Q99733 375 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TMEM260Q9NX78 707 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 FBXO40Q9UH90 709 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SLC25A27O95847 323 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 BMP15O95972 392 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SLC10A3P09131 477 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 CYP2C8P10632 490 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ME1P48163 572 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GCLCP48506 637 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ZNF174Q15697 407 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 INF2Q27J81 1249 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 LETM2Q2VYF4 491 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RNF207Q6ZRF8 634 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 DNAJC5GQ8N7S2 189 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
TNFRSF1A-211ENST00000538363 B4DLN1 442 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MCM4P33991 863 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MCM7P33993 719 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CYP4F22Q6NT55 531 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CHST13Q8NET6 341 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TBCKQ8TEA7 893 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 HHIPL1Q96JK4 782 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PGBD1Q96JS3 809 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MPHOSPH6Q99547 160 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ANO3Q9BYT9 981 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 THSD7BQ9C0I4 1608 aa12.14□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NOGQ13253 232 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NBR1Q14596 966 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 KCTD2Q14681 263 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CAPNS2Q96L46 248 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SPATC1LQ9H0A9 340 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CLIC4Q9Y696 253 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PARP14Q460N5 1801 aa12.13□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ZNF536O15090 1300 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ATP2A1O14983 1001 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SPTLC2O15270 562 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 YEATS4O95619 227 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RIOX2Q8IUF8 465 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MMP19Q99542 508 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MROH8Q9H579 483 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
TNFRSF1A-211ENST00000538363 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NFIBO00712 420 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 FCER1AP12319 257 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ERCC3P19447 782 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms