RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 FOXN1O15353 648 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 CYTH3O43739 400 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 FCER1AP12319 257 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 ADD1P35611 737 aaKnown RBP12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 Q3C1V9 767 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 TRMT44Q8IYL2 757 aaKnown RBP12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 CCDC12Q8WUD4 166 aaPredicted RBP12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 WASF1Q92558 559 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 SNX21Q969T3 373 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 KIF3AQ9Y496 699 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 PCNTO95613 3336 aa12.76□□□□□ -0.37
AC087235.1-201ENST00000538297 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 ERCC3P19447 782 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 RXRAP19793 462 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 CDC27P30260 824 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 PSMC4P43686 418 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 PTPN5P54829 565 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 SSRP1Q08945 709 aaKnown RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 KCTD2Q14681 263 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 ME3Q16798 604 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 NCAPG2Q86XI2 1143 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 EFCC1Q9HA90 598 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 RAVER2Q9HCJ3 691 aaKnown RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 DIS3Q9Y2L1 958 aaKnown RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
AC087235.1-201ENST00000538297 STK36Q9NRP7 1315 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 DEXIO95424 95 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 HOXC6P09630 235 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 XBP1P17861 261 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 PTPREP23469 700 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 IRF5Q13568 498 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 GPR142Q7Z601 462 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 NBPF11Q86T75 865 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 PIGSQ96S52 555 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 NUDT12Q9BQG2 462 aa12.74□□□□□ -0.37
AC087235.1-201ENST00000538297 CNTNAP5Q8WYK1 1306 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 B4DLN1 442 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 ALAS1P13196 640 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 SCG2P13521 617 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 PDIA4P13667 645 aaKnown RBP12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 LBX1P52954 281 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 GHRHRQ02643 423 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 SCRN1Q12765 414 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 GRB14Q14449 540 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 CCDC174Q6PII3 467 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 ANKRD35Q8N283 1001 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 MSL3Q8N5Y2 521 aaKnown RBP12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 AGBL1Q96MI9 1066 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 PORCNQ9H237 461 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 BARHL2Q9NY43 387 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
AC087235.1-201ENST00000538297 ESYT2A0FGR8 921 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 RGS20O76081 388 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 GNA11P29992 359 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 RGS2P41220 211 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 STK3Q13188 491 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 MORN1Q5T089 497 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 CTU1Q7Z7A3 348 aaKnown RBP12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 PXYLP1Q8TE99 480 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 MMP19Q99542 508 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
AC087235.1-201ENST00000538297 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms