RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 XPAP23025 273 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 WDR11Q9BZH6 1224 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 CUEDC2Q9H467 287 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 LMBRD1Q9NUN5 540 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 SYNJ2BP-COX16A0A087WUM0 186 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 INO80B-WBP1J3KQ70 363 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 INO80BQ9C086 356 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 DBNDD1Q9H9R9 158 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 TYW1Q9NV66 732 aaKnown RBP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 COX16Q9P0S2 106 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 ADGRL2O95490 1459 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 INPP5BP32019 993 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 CTNNA1P35221 906 aaKnown RBP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 EXOC3L4Q17RC7 722 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 PUS3Q9BZE2 481 aaKnown RBP18.38■□□□□ 0.53
SCARB1-205ENST00000538291 DISP1Q96F81 1524 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 TRAPPC10P48553 1259 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 VPS41P49754 854 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 MYL7Q01449 175 aa18.38■□□□□ 0.53
SCARB1-205ENST00000538291 GAP43P17677 238 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 ADORA1P30542 326 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 RBBP5Q15291 538 aaKnown RBP18.37■□□□□ 0.53
SCARB1-205ENST00000538291 SPATA1Q5VX52 437 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 KRT27Q7Z3Y8 459 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 BBOF1Q8ND07 529 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 GSTA1P08263 222 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 GSTA2P09210 222 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 PDIA3P30101 505 aaKnown RBP18.37■□□□□ 0.53
SCARB1-205ENST00000538291 PRPSAP1Q14558 356 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 TSNAXIP1Q2TAA8 658 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
SCARB1-205ENST00000538291 IFT122Q9HBG6 1241 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 SCYL1Q96KG9 808 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 HOMER3Q9NSC5 361 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 SERPINB13Q9UIV8 391 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 MGARPQ8TDB4 240 aa18.37■□□□□ 0.53
SCARB1-205ENST00000538291 GCFC2P16383 781 aaKnown RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ARHGAP25P42331 645 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 PCDHA4Q9UN74 947 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 MYOM2P54296 1465 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 BUB1O43683 1085 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 NAA25Q14CX7 972 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 PHLDB2Q86SQ0 1253 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 RNF26Q9BY78 433 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 PLEKHA4Q9H4M7 779 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 hCG_1984214I3L0E3 225 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 BMP3P12645 472 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 LMNB1P20700 586 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 RASSF2P50749 326 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 UBXN2AP68543 259 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ZNF713Q8N859 430 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ZNF148Q9UQR1 794 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 H7C0C1 242 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ATP5OP48047 213 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 CCDC13Q8IYE1 715 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 SKA2Q8WVK7 121 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 LARP4BQ92615 738 aaKnown RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 HAUS4Q9H6D7 363 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 PCDHB4Q9Y5E5 795 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ZSCAN20P17040 1043 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 RNASELQ05823 741 aaKnown RBP18.36■□□□□ 0.53
SCARB1-205ENST00000538291 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 ZMYM1Q5SVZ6 1142 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 CDKL2Q92772 493 aa18.36■□□□□ 0.53
SCARB1-205ENST00000538291 GDF11O95390 407 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 GARSP41250 739 aaKnown RBP18.35■□□□□ 0.53
SCARB1-205ENST00000538291 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 SNX25Q9H3E2 840 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 PCDHA7Q9UN72 937 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 CCND2P30279 289 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
SCARB1-205ENST00000538291 CLIC6Q96NY7 704 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ANAPC5Q9UJX4 755 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ARHGEF37A1IGU5 675 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ATF2P15336 505 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ARHGAP4P98171 946 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 PPARDQ03181 441 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 NXNQ6DKJ4 435 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
SCARB1-205ENST00000538291 AK8Q96MA6 479 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 PPP1R12CQ9BZL4 782 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 KMT5AQ9NQR1 393 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ABCD1P33897 745 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 KIAA1841Q6NSI8 718 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 FBXO18Q8NFZ0 1043 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 ACCSQ96QU6 501 aa18.35■□□□□ 0.53
SCARB1-205ENST00000538291 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms