RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 POLIQ9UNA4 740 aa12.27□□□□□ -0.45
LINC00346-201ENST00000538077 NPHP4O75161 1426 aaPredicted RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 SOS2Q07890 1332 aaPredicted RBP12.27□□□□□ -0.45
LINC00346-201ENST00000538077 USP17L3A6NCW0 530 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 USP17L4A6NCW7 530 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 KRIT1O00522 736 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 NDUFA8P51970 172 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 LLGL1Q15334 1064 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 CCDC62Q6P9F0 684 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 USP17L1Q7RTZ2 530 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 C10orf67Q8IYJ2 551 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 MCUR1Q96AQ8 359 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 MAD1L1Q9Y6D9 718 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 PDE8BO95263 885 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 STAT2P52630 851 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 METP08581 1390 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 H7C0C1 242 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
LINC00346-201ENST00000538077 GSTA1P08263 222 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 GSTA2P09210 222 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 ATP5OP48047 213 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 KIAA1841Q6NSI8 718 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 METTL23Q86XA0 190 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 C7orf31Q8N865 590 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 USP28Q96RU2 1077 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 MYOM2P54296 1465 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 TXNDC9O14530 226 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 TUBB4AP04350 444 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 DYNLT1P63172 113 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 RSPH3Q86UC2 560 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF335Q9H4Z2 1342 aaPredicted RBP12.26□□□□□ -0.45
LINC00346-201ENST00000538077 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 USP14P54578 494 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 FOXD4Q12950 439 aaPredicted RBP12.26□□□□□ -0.45
LINC00346-201ENST00000538077 SNX1Q13596 522 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 RPS6KA2Q15349 733 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 GRAMD1CQ8IYS0 662 aa12.26□□□□□ -0.45
LINC00346-201ENST00000538077 XPAP23025 273 aaPredicted RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SYDE2Q5VT97 1194 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 RETREG2Q8NC44 543 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 STK38LQ9Y2H1 464 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SUPT20HL1Q3ZLR7 823 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 LGSNQ5TDP6 509 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 KRT26Q7Z3Y9 468 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ARFGAP2Q8N6H7 521 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ARMCX3Q9UH62 379 aaPredicted RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF589Q86UQ0 364 aaPredicted RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 IWS1Q96ST2 819 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF341Q9BYN7 854 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SUDS3Q9H7L9 328 aaPredicted RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 PCDHA4Q9UN74 947 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ARHGEF12Q9NZN5 1544 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ECE1P42892 770 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 KIF11P52732 1056 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 PPFIA1Q13136 1202 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF274Q96GC6 653 aaPredicted RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 FTOQ9C0B1 505 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 KIF1BO60333 1816 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SGK1O00141 431 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 CD58P19256 250 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 RSRC2Q7L4I2 434 aaKnown RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 PRPF38AQ8NAV1 312 aaKnown RBP12.25□□□□□ -0.45
LINC00346-201ENST00000538077 CEP170P1Q96L14 293 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
LINC00346-201ENST00000538077 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 GOLGA8SH3BPF8 625 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 SLC12A1Q13621 1099 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 UBN1Q9NPG3 1134 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 NXF1Q9UBU9 619 aaKnown RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 SHROOM2Q13796 1616 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 LRRN2O75325 713 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 DDIT3P35638 169 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 AOC3Q16853 763 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 NUCKS1Q9H1E3 243 aaKnown RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 COL4A3BPQ9Y5P4 624 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 PFKFB2O60825 505 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 IREB2P48200 963 aaKnown RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 MECOMQ03112 1051 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 ADCY1Q08828 1119 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 GANCQ8TET4 914 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 RASSF7Q02833 373 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 MESDQ14696 234 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 RINT1Q6NUQ1 792 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 VSIG1Q86XK7 387 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms