RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 UBA7P41226 1012 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 SBK1Q52WX2 424 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 FKBP15Q5T1M5 1219 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 CSGALNACT2Q8N6G5 542 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 CCDC155Q8N6L0 562 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 RASSF8Q8NHQ8 419 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 CNOT6LQ96LI5 555 aaKnown RBP13.54□□□□□ -0.24
CPSF7-218ENST00000537641 AK8Q96MA6 479 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 SH3GL2Q99962 352 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 LACRTQ9GZZ8 138 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 ARPP21Q9UBL0 812 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-218ENST00000537641 USP21Q9UK80 565 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 ABCB11O95342 1321 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 CCDC194A0A1B0GVG4 234 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 RCCD1A6NED2 376 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 PDE2AO00408 941 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 OPA1O60313 960 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 LCA5LO95447 670 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 TCP1P17987 556 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 HOXA7P31268 230 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 HIBADHP31937 336 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 GNAQP50148 359 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 C2orf54Q08AI8 447 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 SPA17Q15506 151 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 ICE2Q659A1 982 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 ZNF384Q8TF68 577 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 ATP8A2Q9NTI2 1148 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 USP17L12C9JPN9 530 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 USP17L21D6R901 530 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 MYBL2P10244 700 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 MTIF2P46199 727 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 EPHB4P54760 987 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 NNTQ13423 1086 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 EMBQ6PCB8 327 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 TADA2BQ86TJ2 420 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 C7orf25Q9BPX7 421 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
CPSF7-218ENST00000537641 JADE2Q9NQC1 790 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 AGPAT5Q9NUQ2 364 aa13.53□□□□□ -0.24
CPSF7-218ENST00000537641 FLT1P17948 1338 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 ATXN2Q99700 1313 aaKnown RBP13.52□□□□□ -0.25
CPSF7-218ENST00000537641 KLRK1P26718 216 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 SKOR1P84550 965 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 MECOMQ03112 1051 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 CCDC178Q5BJE1 867 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 ALS2CLQ60I27 953 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 PACS2Q86VP3 889 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 CREG2Q8IUH2 290 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 CAVIN3Q969G5 261 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 PCMTD1Q96MG8 357 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-218ENST00000537641 ALS2CR12Q96Q35 445 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 NOC4LQ9BVI4 516 aaKnown RBP13.52□□□□□ -0.25
CPSF7-218ENST00000537641 TFR2Q9UP52 801 aa13.52□□□□□ -0.25
CPSF7-218ENST00000537641 ZNF185O15231 689 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 TM4SF1P30408 202 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 PDE4DQ08499 809 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 GRM4Q14833 912 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 MIIPQ5JXC2 388 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPSF7-218ENST00000537641 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
CPSF7-218ENST00000537641 RIN2Q8WYP3 895 aaPredicted RBP13.51□□□□□ -0.25
CPSF7-218ENST00000537641 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
CPSF7-218ENST00000537641 KAT14Q9H8E8 782 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
CPSF7-218ENST00000537641 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 MACROD2A1Z1Q3 448 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 TSPY2A6NKD2 308 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 ADAMTS3O15072 1205 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 EIF3HO15372 352 aaKnown RBP eCLIP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 PJA2O43164 708 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 IRAK1P51617 712 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 AMPD3Q01432 767 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 APBA1Q02410 837 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 ORC2Q13416 577 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 GLE1Q53GS7 698 aaKnown RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 CABP7Q86V35 215 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 CAPS2Q9BXY5 557 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 TRIM9Q9C026 710 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 YY1AP1Q9H869 796 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 TSKSQ9UJT2 592 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms