RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SYTL5Q8TDW5 730 aaPredicted RBP15.3■□□□□ 0.04
PRKDC-206ENST00000536429 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
PRKDC-206ENST00000536429 FRMPD3Q5JV73 1810 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 EVI5O60447 810 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 SGMS1Q86VZ5 419 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 C7orf61Q8IZ16 206 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 ARRDC4Q8NCT1 418 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 RGS22Q8NE09 1264 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 CTCFLQ8NI51 663 aaPredicted RBP15.29■□□□□ 0.04
PRKDC-206ENST00000536429 FERMT2Q96AC1 680 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
PRKDC-206ENST00000536429 MAP3K14Q99558 947 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 MRPL11Q9Y3B7 192 aaKnown RBP15.29■□□□□ 0.04
PRKDC-206ENST00000536429 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 MCM3APO60318 1980 aa15.29■□□□□ 0.04
PRKDC-206ENST00000536429 BAZ2BQ9UIF8 2168 aaKnown RBP15.28■□□□□ 0.04
PRKDC-206ENST00000536429 KBTBD13C9JR72 458 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 REC8O95072 547 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 SMPD1P17405 629 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 EDNRBP24530 442 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 KRT32Q14532 448 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 MICU3Q86XE3 530 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 KLHDC9Q8NEP7 349 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
PRKDC-206ENST00000536429 ADD3Q9UEY8 706 aaKnown RBP15.28■□□□□ 0.04
PRKDC-206ENST00000536429 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
PRKDC-206ENST00000536429 PNMA6FA0A0J9YX94 578 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 hCG_1642624A0A1W2PR95 340 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 CTAGE5O15320 804 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 DUSP11O75319 330 aaKnown RBP15.27■□□□□ 0.04
PRKDC-206ENST00000536429 KIF5BP33176 963 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 TNFAIP2Q03169 654 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 CCSAPQ6IQ19 270 aaPredicted RBP15.27■□□□□ 0.04
PRKDC-206ENST00000536429 APOA5Q6Q788 366 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 RNF180Q86T96 592 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 SPZ1Q9BXG8 430 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 USP26Q9BXU7 913 aa15.27■□□□□ 0.04
PRKDC-206ENST00000536429 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
PRKDC-206ENST00000536429 ALPK3Q96L96 1907 aa15.27■□□□□ 0.03
PRKDC-206ENST00000536429 CFBP00751 764 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 SYN1P17600 705 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 HOXA13P31271 388 aaPredicted RBP15.26■□□□□ 0.03
PRKDC-206ENST00000536429 GJA9P57773 515 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 TMTC3Q6ZXV5 915 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 MCF2L2Q86YR7 1114 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 CCDC82Q8N4S0 544 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 DNERQ8NFT8 737 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 UPF3AQ9H1J1 476 aaKnown RBP15.26■□□□□ 0.03
PRKDC-206ENST00000536429 VTA1Q9NP79 307 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 PHF24Q9UPV7 400 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 NR2E3Q9Y5X4 410 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 LRRC37A2A6NM11 1700 aa15.26■□□□□ 0.03
PRKDC-206ENST00000536429 LAMA3Q16787 3333 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 C6orf222P0C671 652 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-206ENST00000536429 HSD17B4P51659 736 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 BEX3Q00994 111 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 GHRHRQ02643 423 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 PDE4DQ08499 809 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 KCNA10Q16322 511 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 SLC39A5Q6ZMH5 540 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 Q6ZUG5 572 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
PRKDC-206ENST00000536429 RMDN3Q96TC7 470 aa15.25■□□□□ 0.03
PRKDC-206ENST00000536429 FAM217BQ9NTX9 383 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-206ENST00000536429 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 KLF18A0A0U1RQI7 1052 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 A0A1W2PQ45 241 aaPredicted RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 A0A1W2PQY0 241 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 DYNC1LI2O43237 492 aaPredicted RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 CALM1P0DP23 149 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 CALM2P0DP24 149 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 CALM3P0DP25 149 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 EIF2AK2P19525 551 aaKnown RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 RPS6KB1P23443 525 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 GNAQP50148 359 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 RTP1P59025 263 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 APOBRQ0VD83 1088 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 IQSEC1Q6DN90 963 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 BLOC1S2Q6QNY1 142 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 TLK2Q86UE8 772 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 RRP36Q96EU6 259 aaKnown RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 LZTS2Q9BRK4 669 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 WDR11Q9BZH6 1224 aa15.24■□□□□ 0.03
PRKDC-206ENST00000536429 COLQQ9Y215 455 aaPredicted RBP15.24■□□□□ 0.03
PRKDC-206ENST00000536429 RBM47A0AV96 593 aaKnown RBP15.23■□□□□ 0.03
PRKDC-206ENST00000536429 ZBTB43O43298 467 aa15.23■□□□□ 0.03
PRKDC-206ENST00000536429 ARIH2O95376 493 aa15.23■□□□□ 0.03
PRKDC-206ENST00000536429 CASTP20810 708 aaKnown RBP15.23■□□□□ 0.03
PRKDC-206ENST00000536429 CST5P28325 142 aaPredicted RBP15.23■□□□□ 0.03
PRKDC-206ENST00000536429 SMARCA1P28370 1054 aa15.23■□□□□ 0.03
PRKDC-206ENST00000536429 CDC27P30260 824 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms