RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
CDCA3-206ENST00000536241 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 PGBD1Q96JS3 809 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 CA12O43570 354 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 TLR2O60603 784 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 SLC25A27O95847 323 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 HSPA6P17066 643 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 CRHR2Q13324 411 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 PORCNQ9H237 461 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 ACAD9Q9H845 621 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 TFIP11Q9UBB9 837 aaKnown RBP13.18□□□□□ -0.3
CDCA3-206ENST00000536241 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
CDCA3-206ENST00000536241 CCDC194A0A1B0GVG4 234 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 ALDH1A1P00352 501 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 HSD17B4P51659 736 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
CDCA3-206ENST00000536241 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-206ENST00000536241 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 C17orf99Q6UX52 265 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 RNF207Q6ZRF8 634 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 ATP6V1DQ9Y5K8 247 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 ADGRA2Q96PE1 1338 aa13.17□□□□□ -0.3
CDCA3-206ENST00000536241 SPDYE3A6NKU9 549 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 BCRP11274 1271 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 CCNA1P78396 465 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 INF2Q27J81 1249 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 KRT25Q7Z3Z0 450 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 TAAR1Q96RJ0 339 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 COL20A1Q9P218 1284 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 FOSP01100 380 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 COPB2P35606 906 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 GHRHRQ02643 423 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
CDCA3-206ENST00000536241 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 ANO3Q9BYT9 981 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 MROH8Q9H579 483 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
CDCA3-206ENST00000536241 WNT7AO00755 349 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 EDIL3O43854 480 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 TRPA1O75762 1119 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 NBR1Q14596 966 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 ZNF396Q96N95 335 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-206ENST00000536241 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
CDCA3-206ENST00000536241 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
CDCA3-206ENST00000536241 FCER1AP12319 257 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
CDCA3-206ENST00000536241 UBXN2AP68543 259 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 ZNF174Q15697 407 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 MMP19Q99542 508 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDCA3-206ENST00000536241 MAF1Q9H063 256 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
CDCA3-206ENST00000536241 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
CDCA3-206ENST00000536241 TCHHQ07283 1943 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 PGK2P07205 417 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 KCTD2Q14681 263 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
CDCA3-206ENST00000536241 LETM2Q2VYF4 491 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 NEK8Q86SG6 692 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
CDCA3-206ENST00000536241 RMDN3Q96TC7 470 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
CDCA3-206ENST00000536241 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 STRNO43815 780 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 CCNT1O60563 726 aaKnown RBP13.12□□□□□ -0.31
CDCA3-206ENST00000536241 MAPK4P31152 587 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 MCM7P33993 719 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 SREBF1P36956 1147 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms