RNA–Protein interactions for RNA: ENST00000535887.1

C12orf4-204, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-204ENST00000535887 HOXA5P20719 270 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 ADGRF1Q5T601 910 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 GTF2IRD2BQ6EKJ0 949 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 GTF2IRD2Q86UP8 949 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 SIRT2Q8IXJ6 389 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 CELF2-AS1Q8N7Q2 184 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 NUP43Q8NFH3 380 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 HNRNPLLQ8WVV9 542 aaKnown RBP8.38□□□□□ -1.07
C12orf4-204ENST00000535887 KCNN1Q92952 543 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 ZNF669Q96BR6 464 aaPredicted RBP8.38□□□□□ -1.07
C12orf4-204ENST00000535887 MMP19Q99542 508 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 MCOLN1Q9GZU1 580 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 JAG2Q9Y219 1238 aa8.38□□□□□ -1.07
C12orf4-204ENST00000535887 MYOCOSA0A1B0GUC4 107 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 A0A1W2PQ27 194 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 A0A1W2PQ64 194 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 A0A1W2PQC6 194 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 A0A1W2PQD8 194 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 B2RBV5 119 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 SRGAP3O43295 1099 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 STK10O94804 968 aaKnown RBP8.37□□□□□ -1.07
C12orf4-204ENST00000535887 ITGAVP06756 1048 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 GALK1P51570 392 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 RBL2Q08999 1139 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 NR1I3Q14994 352 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 SV2CQ496J9 727 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 IQCEQ6IPM2 695 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 ZNF605Q86T29 641 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 ZNF227Q86WZ6 799 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 SGSM3Q96HU1 749 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 TANGO6Q9C0B7 1094 aa8.37□□□□□ -1.07
C12orf4-204ENST00000535887 SMG5Q9UPR3 1016 aaKnown RBP8.37□□□□□ -1.07
C12orf4-204ENST00000535887 NPHP3-ACAD11A0A0J9YXS1 232 aa8.36□□□□□ -1.07
C12orf4-204ENST00000535887 TESK1Q15569 626 aa8.36□□□□□ -1.07
C12orf4-204ENST00000535887 CIAPIN1Q6FI81 312 aa8.36□□□□□ -1.07
C12orf4-204ENST00000535887 CKAP2LQ8IYA6 745 aa8.36□□□□□ -1.07
C12orf4-204ENST00000535887 ST13P5Q8NFI4 369 aaPredicted RBP8.36□□□□□ -1.07
C12orf4-204ENST00000535887 KLHL14Q9P2G3 628 aa8.36□□□□□ -1.07
C12orf4-204ENST00000535887 AGRPO00253 132 aa8.35□□□□□ -1.07
C12orf4-204ENST00000535887 CPP00450 1065 aa8.35□□□□□ -1.07
C12orf4-204ENST00000535887 MSL3P1P0C860 447 aa8.35□□□□□ -1.07
C12orf4-204ENST00000535887 SLC10A6Q3KNW5 377 aa8.35□□□□□ -1.07
C12orf4-204ENST00000535887 LRP2BPQ9P2M1 347 aa8.35□□□□□ -1.07
C12orf4-204ENST00000535887 TCAF2A6NFQ2 919 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 CYBBP04839 570 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 DLG4P78352 724 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 CYP4F3Q08477 520 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 SCRN1Q12765 414 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 E4F1Q66K89 784 aaPredicted RBP8.34□□□□□ -1.07
C12orf4-204ENST00000535887 PAQR3Q6TCH7 311 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 NPLOC4Q8TAT6 608 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 HIRIP3Q9BW71 556 aaPredicted RBP8.34□□□□□ -1.07
C12orf4-204ENST00000535887 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
C12orf4-204ENST00000535887 IQCA1LA6NCM1 817 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 THBDP07204 575 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 PLS3P13797 630 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 MAPKAPK2P49137 400 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 LINC00310P59036 64 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 FRS2Q8WU20 508 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 PPP1R14AQ96A00 147 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 GCM1Q9NP62 436 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 GPRC5CQ9NQ84 441 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 ST7Q9NRC1 585 aa8.33□□□□□ -1.08
C12orf4-204ENST00000535887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
C12orf4-204ENST00000535887 C7orf72A4D263 438 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 NUAK1O60285 661 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 VIPR1P32241 457 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 SRSF3P84103 164 aaKnown RBP8.32□□□□□ -1.08
C12orf4-204ENST00000535887 ACBD5Q5T8D3 534 aaPredicted RBP8.32□□□□□ -1.08
C12orf4-204ENST00000535887 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 KREMEN2Q8NCW0 462 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 TRIM55Q9BYV6 548 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 CCDC113Q9H0I3 377 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 SIRT5Q9NXA8 310 aa8.32□□□□□ -1.08
C12orf4-204ENST00000535887 MBD1Q9UIS9 605 aaPredicted RBP8.32□□□□□ -1.08
C12orf4-204ENST00000535887 A0A1W2PQJ5 194 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 A0A1W2PQU0 124 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 NPHS1O60500 1241 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 PPP1R11O60927 126 aaPredicted RBP8.31□□□□□ -1.08
C12orf4-204ENST00000535887 DBHP09172 617 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 GLI4P10075 376 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 RAB3GAP1Q15042 981 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 SOGA3Q5TF21 947 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 RPTNQ6XPR3 784 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 LZTR1Q8N653 840 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 BTN2A2Q8WVV5 523 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 IRF2BPLQ9H1B7 796 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 CLEC1BQ9P126 229 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 SIRPGQ9P1W8 387 aa8.31□□□□□ -1.08
C12orf4-204ENST00000535887 IRS2Q9Y4H2 1338 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 TBX1O43435 398 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 SDHBP21912 280 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 GFRA1P56159 465 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 SF3A1Q15459 793 aaKnown RBP8.3□□□□□ -1.08
C12orf4-204ENST00000535887 BICRALQ6AI39 1079 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 LRP10Q7Z4F1 713 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 CPNE8Q86YQ8 564 aa8.3□□□□□ -1.08
C12orf4-204ENST00000535887 LGR4Q9BXB1 951 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms