RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 LSP1P33241 339 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 PARD3BQ8TEW8 1205 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 LMBR1Q8WVP7 490 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 TNFRSF25Q93038 417 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 NSUN4Q96CB9 384 aaKnown RBP21.3■■□□□ 1
SMPD1-210ENST00000534405 CCDC114Q96M63 670 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 MFAP3LO75121 409 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 RPS6KA3P51812 740 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 NUTM2AQ8IVF1 878 aaPredicted RBP21.29■■□□□ 1
SMPD1-210ENST00000534405 TRIML1Q8N9V2 468 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 CCDC51Q96ER9 411 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 ZMYND10O75800 440 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 XBP1P17861 261 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 AFMP43652 599 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 EMC10Q5UCC4 262 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 SYMPKQ92797 1274 aaKnown RBP21.29■■□□□ 1
SMPD1-210ENST00000534405 SCLT1Q96NL6 688 aa21.29■■□□□ 1
SMPD1-210ENST00000534405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.29■■□□□ 1
SMPD1-210ENST00000534405 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 MYH13Q9UKX3 1938 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 MECOMQ03112 1051 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 CKAP4Q07065 602 aaKnown RBP21.28■■□□□ 1
SMPD1-210ENST00000534405 E2F5Q15329 346 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 ZNF174Q15697 407 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 TMTC3Q6ZXV5 915 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 FBXO33Q7Z6M2 555 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 OR8K1Q8NGG5 319 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 CNTNAP5Q8WYK1 1306 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 SRRM3A6NNA2 597 aaPredicted RBP21.28■■□□□ 1
SMPD1-210ENST00000534405 PSMD14O00487 310 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 ADAMTS3O15072 1205 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 VEGFAP15692 232 aaPredicted RBP21.28■■□□□ 1
SMPD1-210ENST00000534405 CD44P16070 742 aaKnown RBP21.28■■□□□ 1
SMPD1-210ENST00000534405 FAM47AQ5JRC9 791 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 ALS2CLQ60I27 953 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 TBC1D9BQ66K14 1250 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 KANK3Q6NY19 840 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 KDM7AQ6ZMT4 941 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 SRBD1Q8N5C6 995 aaKnown RBP21.28■■□□□ 1
SMPD1-210ENST00000534405 ARL8AQ96BM9 186 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 DACH1Q9UI36 760 aa21.28■■□□□ 1
SMPD1-210ENST00000534405 DLEC1Q9Y238 1755 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 CYP2D6P10635 497 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 PBX1P40424 430 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 PLCD1P51178 756 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 IFT88Q13099 833 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 SLC5A9Q2M3M2 681 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 SH3RF1Q7Z6J0 888 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 TFCP2L1Q9NZI6 479 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 RPSAP08865 295 aaKnown RBP21.27■■□□□ 1
SMPD1-210ENST00000534405 PRPHP41219 470 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 TMTC1Q8IUR5 882 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 PAGE5Q96GU1 130 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 DCP1AQ9NPI6 582 aaPredicted RBP21.27■■□□□ 1
SMPD1-210ENST00000534405 IRAK4Q9NWZ3 460 aa21.27■■□□□ 1
SMPD1-210ENST00000534405 PPP1R12BO60237 982 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-210ENST00000534405 PRDX5P30044 214 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 PTGISQ16647 500 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 SND1Q7KZF4 910 aaKnown RBP eCLIP21.26■□□□□ 0.993e-6■■□□□ 12.2
SMPD1-210ENST00000534405 CNGA4Q8IV77 575 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 TCP11Q8WWU5 503 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 RUBCNQ92622 972 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 FILIP1LQ4L180 1135 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 PAPD7Q5XG87 772 aaKnown RBP21.26■□□□□ 0.99
SMPD1-210ENST00000534405 APTXQ7Z2E3 356 aaKnown RBP21.26■□□□□ 0.99
SMPD1-210ENST00000534405 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 MYCBPAPQ8TBZ2 947 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 THOC1Q96FV9 657 aaKnown RBP21.26■□□□□ 0.99
SMPD1-210ENST00000534405 CCT8L2Q96SF2 557 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 ZBTB12Q9Y330 459 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-210ENST00000534405 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-210ENST00000534405 SAR1BQ9Y6B6 198 aa21.26■□□□□ 0.99
SMPD1-210ENST00000534405 TEX33O43247 280 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 CAND2O75155 1236 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 DDAH1O94760 285 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 KCNB1Q14721 858 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 PDCD2Q16342 344 aaPredicted RBP21.25■□□□□ 0.99
SMPD1-210ENST00000534405 CCDC121Q6ZUS5 278 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 NLRP14Q86W24 1093 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 SMYD4Q8IYR2 804 aaPredicted RBP21.25■□□□□ 0.99
SMPD1-210ENST00000534405 RASSF8Q8NHQ8 419 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 MGRN1O60291 552 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 PPP1R37O75864 691 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 ERCC5P28715 1186 aaPredicted RBP21.25■□□□□ 0.99
SMPD1-210ENST00000534405 RAB27AP51159 221 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 STX17P56962 302 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 TTC38Q5R3I4 469 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 KLHL10Q6JEL2 608 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 TAX1BP1Q86VP1 789 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 ZBTB10Q96DT7 871 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 JAG2Q9Y219 1238 aa21.25■□□□□ 0.99
SMPD1-210ENST00000534405 FAM107AO95990 144 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 CALM1P0DP23 149 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 CALM2P0DP24 149 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 CALM3P0DP25 149 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 DPYDQ12882 1025 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 CUL4BQ13620 913 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 PTF1AQ7RTS3 328 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 STAMQ92783 540 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms