RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 SRBD1Q8N5C6 995 aaKnown RBP24.79■■□□□ 1.56
PKP3-211ENST00000534401 ARRDC4Q8NCT1 418 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 TCEANC2Q96MN5 208 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 JAKMIP1Q96N16 626 aaKnown RBP24.79■■□□□ 1.56
PKP3-211ENST00000534401 HTATIP2Q9BUP3 242 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 MAP3K20Q9NYL2 800 aaKnown RBP24.79■■□□□ 1.56
PKP3-211ENST00000534401 BRPF3Q9ULD4 1205 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 DNM1LO00429 736 aa24.78■■□□□ 1.56
PKP3-211ENST00000534401 HSD17B4P51659 736 aa24.78■■□□□ 1.56
PKP3-211ENST00000534401 SYTL5Q8TDW5 730 aaPredicted RBP24.78■■□□□ 1.56
PKP3-211ENST00000534401 TM6SF1Q9BZW5 370 aa24.78■■□□□ 1.56
PKP3-211ENST00000534401 C11orf49Q9H6J7 331 aa24.78■■□□□ 1.56
PKP3-211ENST00000534401 PCDHA1Q9Y5I3 950 aa24.78■■□□□ 1.56
PKP3-211ENST00000534401 ADCY6O43306 1168 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 DUSP11O75319 330 aaKnown RBP24.77■■□□□ 1.56
PKP3-211ENST00000534401 PLEKHA8P1O95397 391 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 RARBP10826 455 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 RPS6KB1P23443 525 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 LRRC41Q15345 812 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 CCDC144BQ3MJ40 725 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 TAPT1Q6NXT6 567 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 BLOC1S2Q6QNY1 142 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 ZSWIM6Q9HCJ5 1215 aa24.77■■□□□ 1.56
PKP3-211ENST00000534401 RBM47A0AV96 593 aaKnown RBP24.76■■□□□ 1.55
PKP3-211ENST00000534401 ADAMTS4O75173 837 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 CPA1P15085 419 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 CALML3P27482 149 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 PSMA5P28066 241 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 EVCP57679 992 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 FUT2Q10981 343 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 ANO1Q5XXA6 986 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 TMTC3Q6ZXV5 915 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 IL17RAQ96F46 866 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 UPF3AQ9H1J1 476 aaKnown RBP24.76■■□□□ 1.55
PKP3-211ENST00000534401 VTA1Q9NP79 307 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 FAM217BQ9NTX9 383 aaPredicted RBP24.76■■□□□ 1.55
PKP3-211ENST00000534401 COL20A1Q9P218 1284 aa24.76■■□□□ 1.55
PKP3-211ENST00000534401 DDX49Q9Y6V7 483 aaKnown RBP24.76■■□□□ 1.55
PKP3-211ENST00000534401 RXRAP19793 462 aa24.75■■□□□ 1.55
PKP3-211ENST00000534401 PRPF38BQ5VTL8 546 aaKnown RBP24.75■■□□□ 1.55
PKP3-211ENST00000534401 KLHDC9Q8NEP7 349 aa24.75■■□□□ 1.55
PKP3-211ENST00000534401 XPNPEP3Q9NQH7 507 aa24.75■■□□□ 1.55
PKP3-211ENST00000534401 ZHX1Q9UKY1 873 aaPredicted RBP24.75■■□□□ 1.55
PKP3-211ENST00000534401 IQSEC1Q6DN90 963 aa24.74■■□□□ 1.55
PKP3-211ENST00000534401 CCSAPQ6IQ19 270 aaPredicted RBP24.74■■□□□ 1.55
PKP3-211ENST00000534401 SYNE3Q6ZMZ3 975 aa24.74■■□□□ 1.55
PKP3-211ENST00000534401 HOMER1Q86YM7 354 aa24.74■■□□□ 1.55
PKP3-211ENST00000534401 GNEQ9Y223 722 aaKnown RBP24.74■■□□□ 1.55
PKP3-211ENST00000534401 NID2Q14112 1375 aa24.74■■□□□ 1.55
PKP3-211ENST00000534401 ZBTB43O43298 467 aa24.73■■□□□ 1.55
PKP3-211ENST00000534401 CST5P28325 142 aaPredicted RBP24.73■■□□□ 1.55
PKP3-211ENST00000534401 GJA9P57773 515 aa24.73■■□□□ 1.55
PKP3-211ENST00000534401 PPP2R5BQ15173 497 aa24.73■■□□□ 1.55
PKP3-211ENST00000534401 GJC2Q5T442 439 aaPredicted RBP24.73■■□□□ 1.55
PKP3-211ENST00000534401 Q6ZUG5 572 aa24.73■■□□□ 1.55
PKP3-211ENST00000534401 MICU3Q86XE3 530 aa24.73■■□□□ 1.55
PKP3-211ENST00000534401 RRP36Q96EU6 259 aaKnown RBP24.73■■□□□ 1.55
PKP3-211ENST00000534401 TAAR1Q96RJ0 339 aa24.73■■□□□ 1.55
PKP3-211ENST00000534401 TSEN34Q9BSV6 310 aaKnown RBP24.73■■□□□ 1.55
PKP3-211ENST00000534401 RBM28Q9NW13 759 aaKnown RBP24.73■■□□□ 1.55
PKP3-211ENST00000534401 SYNRGQ9UMZ2 1314 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 CTAGE5O15320 804 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 CASTP20810 708 aaKnown RBP24.72■■□□□ 1.55
PKP3-211ENST00000534401 RUFY3Q7L099 469 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 RAB11FIP4Q86YS3 637 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 LENG1Q96BZ8 264 aaPredicted RBP24.72■■□□□ 1.55
PKP3-211ENST00000534401 IWS1Q96ST2 819 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 PDGFCQ9NRA1 345 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 PHF24Q9UPV7 400 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 Q9Y3F1 56 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 DNAH12Q6ZR08 3092 aa24.72■■□□□ 1.55
PKP3-211ENST00000534401 KLF18A0A0U1RQI7 1052 aa24.71■■□□□ 1.55
PKP3-211ENST00000534401 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.71■■□□□ 1.55
PKP3-211ENST00000534401 PGK1P00558 417 aa24.71■■□□□ 1.55
PKP3-211ENST00000534401 NSUN6Q8TEA1 469 aaKnown RBP24.71■■□□□ 1.55
PKP3-211ENST00000534401 KIAA1217Q5T5P2 1943 aa24.71■■□□□ 1.55
PKP3-211ENST00000534401 B4DLN1 442 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 KBTBD13C9JR72 458 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 EIF5BO60841 1220 aaKnown RBP24.7■■□□□ 1.54
PKP3-211ENST00000534401 ADCYAP1R1P41586 468 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 MRPL12P52815 198 aaKnown RBP24.7■■□□□ 1.54
PKP3-211ENST00000534401 ANAPC15P60006 121 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 TNFAIP2Q03169 654 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 RTN1Q16799 776 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 RNF180Q86T96 592 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 FBXO16Q8IX29 292 aaPredicted RBP24.7■■□□□ 1.54
PKP3-211ENST00000534401 CMTR1Q8N1G2 835 aaKnown RBP24.7■■□□□ 1.54
PKP3-211ENST00000534401 BRF1Q92994 677 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 RMDN3Q96TC7 470 aa24.7■■□□□ 1.54
PKP3-211ENST00000534401 CNTNAP5Q8WYK1 1306 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 CFBP00751 764 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 SMPD1P17405 629 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 CDC27P30260 824 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 APOBRQ0VD83 1088 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 SNX17Q15036 470 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 C1orf53Q5VUE5 145 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 DPF3Q92784 378 aa24.69■■□□□ 1.54
PKP3-211ENST00000534401 MPHOSPH6Q99547 160 aaKnown RBP24.69■■□□□ 1.54
PKP3-211ENST00000534401 SENP6Q9GZR1 1112 aaPredicted RBP24.69■■□□□ 1.54
PKP3-211ENST00000534401 PDE4DQ08499 809 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms