RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	ATXN3L	Q9H3M9	355 aa		5.23	□□□□□ -1.57
PICALM-222	ENST00000534375	GSX1	Q9H4S2	264 aa	Predicted RBP	5.23	□□□□□ -1.57
PICALM-222	ENST00000534375	TCF7L1	Q9HCS4	588 aa		5.23	□□□□□ -1.57
PICALM-222	ENST00000534375	SPTLC3	Q9NUV7	552 aa		5.23	□□□□□ -1.57
PICALM-222	ENST00000534375	GOLGA6A	Q9NYA3	693 aa		5.23	□□□□□ -1.57
PICALM-222	ENST00000534375	MINPP1	Q9UNW1	487 aa		5.23	□□□□□ -1.57
PICALM-222	ENST00000534375	COQ6	Q9Y2Z9	468 aa		5.23	□□□□□ -1.57
PICALM-222	ENST00000534375		B4E1Z4	1266 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	ARVCF	O00192	962 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	CKM	P06732	381 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	DRD2	P14416	443 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	NID1	P14543	1247 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	ATP2A2	P16615	1042 aa	Known RBP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	YBX3	P16989	372 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	GRIK1	P39086	918 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	MECP2	P51608	486 aa	Known RBP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	NEK3	P51956	506 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	SCRN1	Q12765	414 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	GRM3	Q14832	879 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	CREB3L3	Q68CJ9	461 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	CDC37L1	Q7L3B6	337 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	SPICE1	Q8N0Z3	855 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	KCT2	Q8NC54	265 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	CLRN3	Q8NCR9	226 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	DCAF4	Q8WV16	495 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	CHTF18	Q8WVB6	975 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	SLC13A1	Q9BZW2	595 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	UBA5	Q9GZZ9	404 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	MAF1	Q9H063	256 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	PTPRH	Q9HD43	1115 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	THG1L	Q9NWX6	298 aa	Known RBP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	GFOD1	Q9NXC2	390 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	DDX20	Q9UHI6	824 aa	Known RBP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	INTU	Q9ULD6	942 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	CEP131	Q9UPN4	1083 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375	PCDHB12	Q9Y5F1	795 aa		5.22	□□□□□ -1.57
PICALM-222	ENST00000534375		H0Y8X5	98 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	AQP7	O14520	342 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	MSC	O60682	206 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	LRRN2	O75325	713 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	SOD2	P04179	222 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	LPO	P22079	712 aa	Predicted RBP	5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	SERPINB3	P29508	390 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	LSS	P48449	732 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	RNF4	P78317	190 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	DPY19L1	Q2PZI1	675 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	ATP13A4	Q4VNC1	1196 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	TRAPPC3L	Q5T215	181 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	CYB5RL	Q6IPT4	315 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	KIAA1211	Q6ZU35	1233 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	DDX53	Q86TM3	631 aa	Known RBP	5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	MTDH	Q86UE4	582 aa	Known RBP	5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	CDH24	Q86UP0	819 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	CCDC103	Q8IW40	242 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	CPA6	Q8N4T0	437 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	NPLOC4	Q8TAT6	608 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	FRS2	Q8WU20	508 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	E2F7	Q96AV8	911 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	CCDC140	Q96MF4	163 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	PHF20	Q9BVI0	1012 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	SARG	Q9BW04	601 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	SEMA6B	Q9H3T3	888 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	FAM105A	Q9NUU6	356 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	FBXL21	Q9UKT6	434 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	ACTL7B	Q9Y614	415 aa		5.21	□□□□□ -1.58
PICALM-222	ENST00000534375	C9orf172	C9J069	976 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	FAM229A	H3BQW9	127 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	APAF1	O14727	1248 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	SH3BP5	O60239	455 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	PCDHGA12	O60330	932 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	RNGTT	O60942	597 aa	Known RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	LRIG2	O94898	1065 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	SLITRK5	O94991	958 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	TIAF1	O95411	115 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	CP	P00450	1065 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	FOS	P01100	380 aa	Predicted RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	THBD	P07204	575 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	ASGR2	P07307	311 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	IRX6	P78412	446 aa	Predicted RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	AMPD2	Q01433	879 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	SOX4	Q06945	474 aa	Predicted RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	KLF1	Q13351	362 aa	Predicted RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	GBX1	Q14549	363 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	DUOXA2	Q1HG44	320 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	LONRF3	Q496Y0	759 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	TMEM240	Q5SV17	173 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	NOL9	Q5SY16	702 aa	Known RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	ERAP2	Q6P179	960 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	LETMD1	Q6P1Q0	360 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	TMC3	Q7Z5M5	1100 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	MAP4K3	Q8IVH8	894 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	PPIL6	Q8IXY8	311 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	CMIP	Q8IY22	773 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	PJA1	Q8NG27	643 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	FBXO41	Q8TF61	875 aa		5.2	□□□□□ -1.58
PICALM-222	ENST00000534375	RNF141	Q8WVD5	230 aa		5.2	□□□□□ -1.58

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