RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 TCP11X2Q5H9J9 407 aa15.32■□□□□ 0.04
FOXRED1-218ENST00000534315 PPP4R3AQ6IN85 833 aa15.32■□□□□ 0.04
FOXRED1-218ENST00000534315 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
FOXRED1-218ENST00000534315 CSRNP1Q96S65 589 aa15.32■□□□□ 0.04
FOXRED1-218ENST00000534315 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
FOXRED1-218ENST00000534315 TAB2Q9NYJ8 693 aa15.32■□□□□ 0.04
FOXRED1-218ENST00000534315 LRRC10BA6NIK2 292 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 AKR1B15C9JRZ8 316 aaPredicted RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 F5H6K3 240 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 RRP9O43818 475 aaKnown RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 GH2P01242 217 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 ASIC1P78348 528 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 KLRC3Q07444 240 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 RBL2Q08999 1139 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 SEMA3FQ13275 785 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 STIM1Q13586 685 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 HSP90AA2PQ14568 343 aaPredicted RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 VPS16Q9H269 839 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 BLOC1S4Q9NUP1 217 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 DDX25Q9UHL0 483 aaKnown RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L15C9J2P7 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L13C9JLJ4 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L11C9JVI0 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L18D6R9N7 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L22D6RA61 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L17D6RBQ6 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L19D6RCP7 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L20D6RJB6 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 H7C1D1 291 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 PSMA7O14818 248 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 N4BP3O15049 544 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 NDUFB10O96000 172 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 PDE4DQ08499 809 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L24Q0WX57 530 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 USP17L6PQ6QN14 398 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 PPFIBP1Q86W92 1011 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 IRF2BP1Q8IU81 584 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 REXO1L1PQ8IX06 675 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 ANKRD20A12PQ8NF67 263 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 RAB34Q9BZG1 259 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
FOXRED1-218ENST00000534315 RAD17O75943 681 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 AMPD3Q01432 767 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 PDIA5Q14554 519 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 RSBN1LQ6PCB5 846 aaPredicted RBP15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 CPLX3Q8WVH0 158 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 CCDC47Q96A33 483 aaKnown RBP15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 PANX2Q96RD6 677 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 COL4A5P29400 1685 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
FOXRED1-218ENST00000534315 CLRN2A0PK11 232 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 PSMD14O00487 310 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 SNAP25P60880 206 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 HAS1Q92839 578 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 GJA10Q969M2 543 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 CDK5RAP3Q96JB5 506 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 TRIM47Q96LD4 638 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 NUDT12Q9BQG2 462 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 STK17AQ9UEE5 414 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 ZSCAN12O43309 604 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 GYPCP04921 128 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 FCER1AP12319 257 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 GCFC2P16383 781 aaKnown RBP15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 STK4Q13043 487 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 MCM6Q14566 821 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 SV2BQ7L1I2 683 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 GLT8D2Q9H1C3 349 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
FOXRED1-218ENST00000534315 MFAP3LO75121 409 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 CASP14P31944 242 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 LARGE2Q8N3Y3 721 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 DHTKD1Q96HY7 919 aaPredicted RBP15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 PSMD1Q99460 953 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 SRRTQ9BXP5 876 aaKnown RBP15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 ANO3Q9BYT9 981 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 THAP9Q9H5L6 903 aa15.28■□□□□ 0.04
FOXRED1-218ENST00000534315 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms