RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-223ENST00000534283 DUSP28Q4G0W2 176 aa28.47■■■□□ 2.15
RELA-223ENST00000534283 GPATCH4Q5T3I0 446 aaKnown RBP28.47■■■□□ 2.15
RELA-223ENST00000534283 IL25Q9H293 177 aa28.47■■■□□ 2.15
RELA-223ENST00000534283 CPVLQ9H3G5 476 aa28.47■■■□□ 2.15
RELA-223ENST00000534283 PTPDC1A2A3K4 754 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 EDNRBP24530 442 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 ITGA7Q13683 1181 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 RNF207Q6ZRF8 634 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.46■■■□□ 2.152e-9■■□□□ 13.1
RELA-223ENST00000534283 UBA5Q9GZZ9 404 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 ZSWIM5Q9P217 1185 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 MCM3APO60318 1980 aa28.46■■■□□ 2.15
RELA-223ENST00000534283 B4E1Z4 1266 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 DLL1O00548 723 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 ZEB2O60315 1214 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 CALML3P27482 149 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 PDE4AP27815 886 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 RPS6P62753 249 aaKnown RBP28.45■■■□□ 2.14
RELA-223ENST00000534283 CCDC178Q5BJE1 867 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 TMEM240Q5SV17 173 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 RASIP1Q5U651 963 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 PNMA1Q8ND90 353 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 RGS22Q8NE09 1264 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 ZSCAN10Q96SZ4 725 aaPredicted RBP28.45■■■□□ 2.14
RELA-223ENST00000534283 WDR11Q9BZH6 1224 aa28.45■■■□□ 2.14
RELA-223ENST00000534283 TLR3O15455 904 aaKnown RBP28.44■■■□□ 2.14
RELA-223ENST00000534283 CSF2RAP15509 400 aa28.44■■■□□ 2.14
RELA-223ENST00000534283 PPIGQ13427 754 aaKnown RBP eCLIP28.44■■■□□ 2.148e-7■■■□□ 14.9
RELA-223ENST00000534283 IQCA1Q86XH1 822 aa28.44■■■□□ 2.14
RELA-223ENST00000534283 ENAHQ8N8S7 591 aaPredicted RBP28.44■■■□□ 2.14
RELA-223ENST00000534283 SEZ6LQ9BYH1 1024 aa28.44■■■□□ 2.14
RELA-223ENST00000534283 CTNNA3Q9UI47 895 aa28.43■■■□□ 2.14
RELA-223ENST00000534283 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.42■■■□□ 2.14
RELA-223ENST00000534283 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.42■■■□□ 2.14
RELA-223ENST00000534283 CYP2C18P33260 490 aa28.42■■■□□ 2.14
RELA-223ENST00000534283 PSMC6P62333 389 aa28.42■■■□□ 2.14
RELA-223ENST00000534283 IMMTQ16891 758 aaKnown RBP28.42■■■□□ 2.14
RELA-223ENST00000534283 TMEM199Q8N511 208 aa28.42■■■□□ 2.14
RELA-223ENST00000534283 DNERQ8NFT8 737 aa28.42■■■□□ 2.14
RELA-223ENST00000534283 PPP1R12CQ9BZL4 782 aa28.42■■■□□ 2.14
RELA-223ENST00000534283 TRPV6Q9H1D0 765 aa28.42■■■□□ 2.14
RELA-223ENST00000534283 SUPT16HQ9Y5B9 1047 aaKnown RBP28.42■■■□□ 2.14
RELA-223ENST00000534283 TMEM265A0A087WTH1 108 aa28.41■■■□□ 2.14
RELA-223ENST00000534283 GSPT1P15170 499 aaKnown RBP28.41■■■□□ 2.14
RELA-223ENST00000534283 KAT14Q9H8E8 782 aa28.41■■■□□ 2.14
RELA-223ENST00000534283 LRRC37A2A6NM11 1700 aa28.4■■■□□ 2.14
RELA-223ENST00000534283 CDC37Q16543 378 aaPredicted RBP28.4■■■□□ 2.14
RELA-223ENST00000534283 ADGRF4Q8IZF3 695 aa28.4■■■□□ 2.14
RELA-223ENST00000534283 TBC1D5Q92609 795 aa28.4■■■□□ 2.14
RELA-223ENST00000534283 MAF1Q9H063 256 aa28.4■■■□□ 2.14
RELA-223ENST00000534283 LCTP09848 1927 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 B4GALT4O60513 344 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 ACRP10323 421 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 PDE4DQ08499 809 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 USH1GQ495M9 461 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 ZNF365Q70YC5 407 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 NOC4LQ9BVI4 516 aaKnown RBP28.39■■■□□ 2.14
RELA-223ENST00000534283 KRT23Q9C075 422 aa28.39■■■□□ 2.14
RELA-223ENST00000534283 TNKSO95271 1327 aa28.39■■■□□ 2.13
RELA-223ENST00000534283 UMODL1Q5DID0 1318 aa28.39■■■□□ 2.13
RELA-223ENST00000534283 PURAQ00577 322 aaKnown RBP28.38■■■□□ 2.13
RELA-223ENST00000534283 ASPRV1Q53RT3 343 aa28.38■■■□□ 2.13
RELA-223ENST00000534283 HIPK3Q9H422 1215 aa28.38■■■□□ 2.13
RELA-223ENST00000534283 IL23AQ9NPF7 189 aa28.38■■■□□ 2.13
RELA-223ENST00000534283 TTC22Q5TAA0 569 aa28.37■■■□□ 2.13
RELA-223ENST00000534283 MYLIPQ8WY64 445 aa28.37■■■□□ 2.13
RELA-223ENST00000534283 VWCEQ96DN2 955 aa28.37■■■□□ 2.13
RELA-223ENST00000534283 ALDH8A1Q9H2A2 487 aaPredicted RBP28.37■■■□□ 2.13
RELA-223ENST00000534283 CNNM2Q9H8M5 875 aa28.37■■■□□ 2.13
RELA-223ENST00000534283 JMJD4Q9H9V9 463 aa28.37■■■□□ 2.13
RELA-223ENST00000534283 POLR3EQ9NVU0 708 aa28.37■■■□□ 2.13
RELA-223ENST00000534283 NKRFO15226 690 aaKnown RBP eCLIP28.36■■■□□ 2.139e-6■□□□□ 8.3
RELA-223ENST00000534283 DNAJB2P25686 324 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 CPT1AP50416 773 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 SEC23AQ15436 765 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 QRICH1Q2TAL8 776 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 PSRC1Q6PGN9 363 aaPredicted RBP28.36■■■□□ 2.13
RELA-223ENST00000534283 OR6J1Q8NGC5 347 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 SYTL5Q8TDW5 730 aaPredicted RBP28.36■■■□□ 2.13
RELA-223ENST00000534283 SCFD2Q8WU76 684 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 COL20A1Q9P218 1284 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 ABCB11O95342 1321 aa28.36■■■□□ 2.13
RELA-223ENST00000534283 A6NJR5 290 aa28.35■■■□□ 2.13
RELA-223ENST00000534283 PARP1P09874 1014 aaKnown RBP28.35■■■□□ 2.13
RELA-223ENST00000534283 HERVK_113Q902F9 699 aa28.35■■■□□ 2.13
RELA-223ENST00000534283 COPS5Q92905 334 aa28.35■■■□□ 2.13
RELA-223ENST00000534283 TAAR1Q96RJ0 339 aa28.35■■■□□ 2.13
RELA-223ENST00000534283 MPHOSPH6Q99547 160 aaKnown RBP28.35■■■□□ 2.13
RELA-223ENST00000534283 WNT8AQ9H1J5 351 aa28.35■■■□□ 2.13
RELA-223ENST00000534283 CDH23Q9H251 3354 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 GRXCR1A8MXD5 290 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 ARIH2O95376 493 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 GRIN2CQ14957 1233 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 PPP2R5BQ15173 497 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 CCDC62Q6P9F0 684 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 CYB5R4Q7L1T6 521 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.34■■■□□ 2.13
RELA-223ENST00000534283 STAG2Q8N3U4 1231 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 UBAC1Q9BSL1 405 aa28.34■■■□□ 2.13
RELA-223ENST00000534283 MTG1Q9BT17 334 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms