RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SLC43A3Q8NBI5 491 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 SGPP1Q9BX95 441 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 CNTD2Q9H8S5 307 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 NUDT5Q9UKK9 219 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
ITGB1-219ENST00000534049 DBHP09172 617 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 SDHBP21912 280 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 KIR3DS1Q14943 382 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 IQCEQ6IPM2 695 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 LCNL1Q6ZST4 164 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 LZTR1Q8N653 840 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 TINF2Q9BSI4 451 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 EPN3Q9H201 632 aa6.18□□□□□ -1.42
ITGB1-219ENST00000534049 R3HCC1Q9Y3T6 440 aaKnown RBP6.18□□□□□ -1.42
ITGB1-219ENST00000534049 NPHS1O60500 1241 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 VAMP4O75379 141 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 KCNH1O95259 989 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 FGRP09769 529 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 RBM25P49756 843 aaKnown RBP6.17□□□□□ -1.42
ITGB1-219ENST00000534049 LDHDQ86WU2 507 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 TRIM59Q8IWR1 403 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 FAM178BQ8IXR5 827 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 NLGN1Q8N2Q7 840 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 ZNF513Q8N8E2 541 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-219ENST00000534049 NETO2Q8NC67 525 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 COPS5Q92905 334 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 MMP19Q99542 508 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 MCMBPQ9BTE3 642 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 RNF38Q9H0F5 515 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 IRF2BPLQ9H1B7 796 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 CYP26B1Q9NR63 512 aa6.17□□□□□ -1.42
ITGB1-219ENST00000534049 DBR1Q9UK59 544 aaKnown RBP6.17□□□□□ -1.42
ITGB1-219ENST00000534049 E9PSI1 815 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 AGRPO00253 132 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 MSL3P1P0C860 447 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 CDR1P51861 262 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 SLC9A5Q14940 896 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 LARP1BQ659C4 914 aaKnown RBP6.16□□□□□ -1.42
ITGB1-219ENST00000534049 C6orf15Q6UXA7 325 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-219ENST00000534049 PPP1R14AQ96A00 147 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 PEX11GQ96HA9 241 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 NKX2-4Q9H2Z4 354 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.16□□□□□ -1.425e-6■□□□□ 9.7
ITGB1-219ENST00000534049 APEX2Q9UBZ4 518 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 PCDHA5Q9Y5H7 936 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 MRVI1Q9Y6F6 885 aa6.16□□□□□ -1.42
ITGB1-219ENST00000534049 HMGXB3Q12766 1538 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 SMARCA4P51532 1647 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 DDAH1O94760 285 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 ZBTB7AO95365 584 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 GLI4P10075 376 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 PI3P19957 117 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 EPHB3P54753 998 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 CAP1Q01518 475 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 E4F1Q66K89 784 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-219ENST00000534049 GTF2IRD2BQ6EKJ0 949 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 EEPD1Q7L9B9 569 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 GTF2IRD2Q86UP8 949 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 TSPAN17Q96FV3 270 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 MRGPRX3Q96LB0 322 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 GMLQ99445 158 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 LRP2BPQ9P2M1 347 aa6.15□□□□□ -1.42
ITGB1-219ENST00000534049 IRS2Q9Y4H2 1338 aa6.15□□□□□ -1.43
ITGB1-219ENST00000534049 F8W031 263 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-219ENST00000534049 SUSD5O60279 629 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 CPP00450 1065 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 HOXC12P31275 282 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 AFF3P51826 1226 aaKnown RBP6.14□□□□□ -1.43
ITGB1-219ENST00000534049 SCRN1Q12765 414 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 SSPNQ14714 243 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 SV2CQ496J9 727 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 CNKSR3Q6P9H4 555 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 IGDCC3Q8IVU1 814 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 USP33Q8TEY7 942 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 ZNF408Q9H9D4 720 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 NCAPD3P42695 1498 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 ATAD2BQ9ULI0 1458 aa6.14□□□□□ -1.43
ITGB1-219ENST00000534049 C7orf72A4D263 438 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-219ENST00000534049 TACR1P25103 407 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 DNAJA1P31689 397 aaKnown RBP6.13□□□□□ -1.43
ITGB1-219ENST00000534049 GTF2A2P52657 109 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 ZNF200P98182 395 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-219ENST00000534049 KCNAB2Q13303 367 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 FAM129CQ86XR2 697 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 MCF2L2Q86YR7 1114 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 DCP2Q8IU60 420 aaKnown RBP6.13□□□□□ -1.43
ITGB1-219ENST00000534049 UBE2Q2Q8WVN8 375 aa6.13□□□□□ -1.43
ITGB1-219ENST00000534049 DACT3Q96B18 629 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-219ENST00000534049 MYO1BO43795 1136 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 SCG5P05408 212 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 NCAM1P13591 858 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 PLS3P13797 630 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 ETFBP38117 255 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 PRR5P85299 388 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 ACBD5Q5T8D3 534 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-219ENST00000534049 WWC2Q6AWC2 1192 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 ZNF227Q86WZ6 799 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms