RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 SYTL5Q8TDW5 730 aaPredicted RBP15.52■□□□□ 0.08
CMTM1-219ENST00000533953 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
CMTM1-219ENST00000533953 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.08
CMTM1-219ENST00000533953 PDGFCQ9NRA1 345 aa15.52■□□□□ 0.08
CMTM1-219ENST00000533953 PDRG1Q9NUG6 133 aa15.52■□□□□ 0.08
CMTM1-219ENST00000533953 CNPY2Q9Y2B0 182 aa15.52■□□□□ 0.08
CMTM1-219ENST00000533953 MRPL11Q9Y3B7 192 aaKnown RBP15.52■□□□□ 0.08
CMTM1-219ENST00000533953 BAZ2BQ9UIF8 2168 aaKnown RBP15.52■□□□□ 0.07
CMTM1-219ENST00000533953 ZNF236Q9UL36 1845 aa15.52■□□□□ 0.07
CMTM1-219ENST00000533953 ZNFX1Q9P2E3 1918 aaKnown RBP15.51■□□□□ 0.07
CMTM1-219ENST00000533953 ADCY6O43306 1168 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 FARP2O94887 1054 aaPredicted RBP15.51■□□□□ 0.07
CMTM1-219ENST00000533953 GNAQP50148 359 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 FUT2Q10981 343 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 ACVR2BQ13705 512 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 PAWRQ96IZ0 340 aaKnown RBP15.51■□□□□ 0.07
CMTM1-219ENST00000533953 ZFP91Q96JP5 570 aaPredicted RBP15.51■□□□□ 0.07
CMTM1-219ENST00000533953 LZTS2Q9BRK4 669 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 AGXT2Q9BYV1 514 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 KATNBL1Q9H079 304 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 NCOA5Q9HCD5 579 aaKnown RBP15.51■□□□□ 0.07
CMTM1-219ENST00000533953 PNMA2Q9UL42 364 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 OGDHLQ9ULD0 1010 aa15.51■□□□□ 0.07
CMTM1-219ENST00000533953 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
CMTM1-219ENST00000533953 SYNGAP1Q96PV0 1343 aa15.5■□□□□ 0.07
CMTM1-219ENST00000533953 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 SEPT4O43236 478 aa15.5■□□□□ 0.07
CMTM1-219ENST00000533953 PDIA3P30101 505 aaKnown RBP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 ALDH5A1P51649 535 aaPredicted RBP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 GJC2Q5T442 439 aaPredicted RBP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 UBE2Q1Q7Z7E8 422 aa15.5■□□□□ 0.07
CMTM1-219ENST00000533953 FBXO16Q8IX29 292 aaPredicted RBP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 GPKOWQ92917 476 aaPredicted RBP eCLIP15.5■□□□□ 0.07
CMTM1-219ENST00000533953 ASB14A6NK59 587 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 PGK1P00558 417 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 ADCYAP1R1P41586 468 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 STK3Q13188 491 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 CCDC144BQ3MJ40 725 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 NOL8Q76FK4 1167 aaKnown RBP15.49■□□□□ 0.07
CMTM1-219ENST00000533953 FCHSD1Q86WN1 690 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 MCF2L2Q86YR7 1114 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 MSL3Q8N5Y2 521 aaKnown RBP15.49■□□□□ 0.07
CMTM1-219ENST00000533953 RGS22Q8NE09 1264 aa15.49■□□□□ 0.07
CMTM1-219ENST00000533953 CNTNAP5Q8WYK1 1306 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 EIF2AK2P19525 551 aaKnown RBP15.48■□□□□ 0.07
CMTM1-219ENST00000533953 TAPT1Q6NXT6 567 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 HEATR3Q7Z4Q2 680 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 FBXL16Q8N461 479 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 PHKBQ93100 1093 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 ABHD16BQ9H3Z7 469 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 RBM28Q9NW13 759 aaKnown RBP15.48■□□□□ 0.07
CMTM1-219ENST00000533953 PCDH10Q9P2E7 1040 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
CMTM1-219ENST00000533953 FAM184BQ9ULE4 1060 aa15.48■□□□□ 0.07
CMTM1-219ENST00000533953 MYADML2A6NDP7 307 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 HSD17B4P51659 736 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 ANAPC15P60006 121 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 WWC2Q6AWC2 1192 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 TYW1BQ6NUM6 668 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 USP17L6PQ6QN14 398 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 MORC4Q8TE76 937 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 XPNPEP3Q9NQH7 507 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 ADD3Q9UEY8 706 aaKnown RBP15.47■□□□□ 0.07
CMTM1-219ENST00000533953 NRBP1Q9UHY1 535 aa15.47■□□□□ 0.07
CMTM1-219ENST00000533953 BRCA2P51587 3418 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 GCOM1H8Y6P7 765 aaPredicted RBP15.46■□□□□ 0.07
CMTM1-219ENST00000533953 POLR2MP0CAP2 368 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 RARBP10826 455 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 AKR1A1P14550 325 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 SMPD1P17405 629 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 AK2P54819 239 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 EVCP57679 992 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 PDE4DQ08499 809 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 LRRC41Q15345 812 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 ARHGEF16Q5VV41 709 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 IL31RAQ8NI17 732 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 FERMT2Q96AC1 680 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 TPCN1Q9ULQ1 816 aa15.46■□□□□ 0.07
CMTM1-219ENST00000533953 ADAMTS3O15072 1205 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 MSCO60682 206 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 MYCLP12524 364 aaPredicted RBP15.45■□□□□ 0.06
CMTM1-219ENST00000533953 EDNRBP24530 442 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 NEK4P51957 841 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 TNFAIP2Q03169 654 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 NTRK3Q16288 839 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 UBE2SQ16763 222 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 NECAB2Q7Z6G3 386 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 DNERQ8NFT8 737 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 NSUN6Q8TEA1 469 aaKnown RBP15.45■□□□□ 0.06
CMTM1-219ENST00000533953 KIF2CQ99661 725 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 C11orf49Q9H6J7 331 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 PXMP2Q9NR77 195 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
CMTM1-219ENST00000533953 MEIS2O14770 477 aa15.44■□□□□ 0.06
CMTM1-219ENST00000533953 DYNC1LI2O43237 492 aaPredicted RBP15.44■□□□□ 0.06
CMTM1-219ENST00000533953 LARGE1O95461 756 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms