RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 TCTN1Q2MV58 587 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 SYDE2Q5VT97 1194 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 B4GALNT3Q6L9W6 998 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
CLP1-206ENST00000533905 EPOPA6NHQ4 379 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 ITGA7Q13683 1181 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
CLP1-206ENST00000533905 ALX1Q15699 326 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
CLP1-206ENST00000533905 OTOP2Q7RTS6 562 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 PPM1EQ8WY54 764 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 EVI5LQ96CN4 794 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 CTAGE1Q96RT6 745 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 ZNF576Q9H609 170 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 SCN5AQ14524 2016 aa12.11□□□□□ -0.47
CLP1-206ENST00000533905 LAMA4Q16363 1823 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 RFXAPO00287 272 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 CALML3P27482 149 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 ZNF543Q08ER8 600 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
CLP1-206ENST00000533905 TTLL4Q14679 1199 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 KIAA1211Q6ZU35 1233 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 EXOC6Q8TAG9 804 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 HIPK3Q9H422 1215 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 HELLSQ9NRZ9 838 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 RAPGEFL1Q9UHV5 662 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
CLP1-206ENST00000533905 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 EDNRBP24530 442 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 PDE4AP27815 886 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 PURAQ00577 322 aaKnown RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 GPNMBQ14956 572 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 USH1GQ495M9 461 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 KRT40Q6A162 431 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 TMCO2Q7Z6W1 182 aaPredicted RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 PCSK9Q8NBP7 692 aaKnown RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 ALDH8A1Q9H2A2 487 aaPredicted RBP12.09□□□□□ -0.47
CLP1-206ENST00000533905 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
CLP1-206ENST00000533905 BDP1A6H8Y1 2624 aa12.08□□□□□ -0.47
CLP1-206ENST00000533905 PTPRSQ13332 1948 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
CLP1-206ENST00000533905 ASB14A6NK59 587 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 OPLAHO14841 1288 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
CLP1-206ENST00000533905 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
CLP1-206ENST00000533905 TOP1P11387 765 aaKnown RBP12.08□□□□□ -0.48
CLP1-206ENST00000533905 PPIGQ13427 754 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLP1-206ENST00000533905 HIC1Q14526 733 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
CLP1-206ENST00000533905 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 DUSP28Q4G0W2 176 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 HERVK_113Q902F9 699 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 WNT8BQ93098 351 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 ZMYM6O95789 1325 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 C5orf42Q9H799 3197 aa12.08□□□□□ -0.48
CLP1-206ENST00000533905 SORBS3O60504 671 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 MYL3P08590 195 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 SDSP20132 328 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 AKNAD1Q5T1N1 836 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 DEFB128Q7Z7B8 93 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 OR6J1Q8NGC5 347 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
CLP1-206ENST00000533905 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
CLP1-206ENST00000533905 VTA1Q9NP79 307 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 TCP11L1Q9NUJ3 509 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 MROH7Q68CQ1 1323 aa12.07□□□□□ -0.48
CLP1-206ENST00000533905 TMEM265A0A087WTH1 108 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 B4E1Z4 1266 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 KDM4AO75164 1064 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 FDX1P10109 184 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
CLP1-206ENST00000533905 LY6KQ17RY6 165 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 IQSEC1Q6DN90 963 aa12.06□□□□□ -0.48
CLP1-206ENST00000533905 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms